Shewanella sp. FDAARGOS_354: CEQ32_07215
Help
Entry
CEQ32_07215 CDS
T04944
Name
(GenBank) ABC transporter substrate-binding protein
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf01503
Cationic antimicrobial peptide (CAMP) resistance
shf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CEQ32_07215
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CEQ32_07215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_07215
Transporters [BR:
shf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
CEQ32_07215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASF14807
LinkDB
All DBs
Position
1587616..1589241
Genome browser
AA seq
541 aa
AA seq
DB search
MSVLIRRLCLATAVFCMSGLLVACGPQRLPSGLVYCSEGNPESFNPQLVTSGTTIDATSH
LIYSRLVDYDALSGQLVPALATSWAESDDGLSYRFTLREDVKFQHSSRFTPSRSFNADDV
LFSFNRIIDKHHPYHGVSRTGYPFFQSIGFSEQVKSVEKINDYEVIFRLARKDASFLSNL
ATDFAVILSSEYAEQQLALGHPENVDHFAIGTGPFTLVHYAKNEYIRYRRNPDFWGEPAN
VEMLVYDITPKSTVRLAKLIAGDCSVSALPKAGELPVIKQHEQLNIESQPGLNVAFWAFN
TQKAPLNDVRVRRALAHAVDKQNILRAVYQNTAIEAIGVLPPASWAYDSNKKLLDYNPQK
ARDLLKEAGINNLSIDIWAMPVARAYNPNALKTAELIQSDLANIGVKVNIISYDWSVFTQ
RLSRDEYDSVLIGWNADNSDPDNFFTPLLSCASMQSNNNRSRWCNKQFDAILDRAREVST
QAERKQIYQEAEAFIAEQVPMLSLAHAKRVALTRNNVHNMQLTPFGGISFTKTSQTTQET
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctaattagacgcctgtgcctagcaactgcggtattctgcatgagtgggttg
ttggttgcatgtggcccccaacggcttccttctggtttggtctattgttccgaagggaat
cccgagtcttttaatccgcagttggtgacctcaggcactacgatcgacgccacttcacac
ctgatttatagccgattagtagactatgacgcgctctctggtcagttggttccggccttg
gcaaccagttgggctgaaagtgatgatggtcttagttatcgttttacgctcagggaggat
gttaagtttcagcattcttcccgttttacgccaagtcgctcatttaacgccgacgacgta
ctgttttccttcaatcgaattatcgataagcatcacccttaccatggtgtgtcacgcact
ggttatcccttttttcaaagtattggtttttctgaacaagttaaaagtgttgaaaaaatc
aatgactatgaagtcatctttcgcttagcccgtaaggatgcttcatttttatcgaattta
gcgactgactttgccgttattctctccagtgagtacgccgaacaacaacttgcactaggt
cacccggaaaatgttgaccattttgccattggtacagggccttttactttagtgcattac
gccaaaaacgaatatattcgctatcgccgtaatccagatttttggggagaacccgccaat
gtcgagatgttggtctatgatatcaccccaaaaagcaccgtgagattagcaaagttaatc
gcgggtgactgcagtgtttcagccctgcccaaagcaggggaacttcccgttattaagcaa
catgaacagctcaatatcgaatcacaacccggccttaacgtagcattttgggcatttaac
actcaaaaagcgccattaaatgatgttcgagttcgccgcgcgctcgcccatgcggtggat
aaacaaaatatcttacgtgctgtgtatcaaaacaccgcaatagaggcgataggcgtactt
ccaccagcctcttgggcctacgacagcaataagaagctactcgattataatccccaaaaa
gccagagacctgctaaaagaggcaggtattaacaatctcagcatcgatatttgggcaatg
cctgttgcgagagcttataatcctaatgcactgaaaacagctgagttaattcaatctgat
ttggccaatatcggtgttaaagtcaacataatcagttacgactggagtgtttttacccaa
agattaagtcgagatgaatacgattcagtgctcatcggctggaacgccgataacagtgat
cccgataactttttcacgccactgcttagctgcgcgtcaatgcaatcaaacaacaaccgc
tctcgctggtgcaataaacagtttgatgccattctagacagagcaagagaagtctcaaca
caagcagagcgcaagcaaatttatcaagaagccgaagcattcatcgccgagcaagtacca
atgctgagtttggctcatgccaaacgggtcgctttaacgcgtaataatgtacataatatg
caactcacgccttttggcggcatttcctttacaaaaaccagccaaaccacacaggagact
aactga
DBGET
integrated database retrieval system
