Shewanella sp. FDAARGOS_354: CEQ32_07255
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Entry
CEQ32_07255 CDS
T04944
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shf03032
]
CEQ32_07255
03036 Chromosome and associated proteins [BR:
shf03036
]
CEQ32_07255
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_07255
DNA replication proteins [BR:
shf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CEQ32_07255
Chromosome and associated proteins [BR:
shf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CEQ32_07255
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CEQ32_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ASF14814
LinkDB
All DBs
Position
complement(1596800..1597072)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKEGDKISLVGFGTFEVRERAERTG
RNPQTGEEIKIAAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcttctggtgctgacatttctaaagccgct
gccggccgtgcactggattcttttatcgcagctgtgactgaaggtttgaaagaaggcgat
aaaatttctcttgttggttttggtacttttgaagtgcgtgagcgcgctgaacgcactggc
cgcaacccacaaacgggtgaagaaatcaaaatcgcagcagcaaagatcccagcttttaaa
gcgggtaaagctctgaaagacgctgtcaattaa
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