Shewanella sp. FDAARGOS_354: CEQ32_07395
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Entry
CEQ32_07395 CDS
T04944
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shf03000
]
CEQ32_07395
Transcription factors [BR:
shf03000
]
Prokaryotic type
Helix-turn-helix
Other families
CEQ32_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
Calci_bind_CcbP
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ASF14839
LinkDB
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Position
1632458..1633675
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AA seq
405 aa
AA seq
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MYVLDQHIAKKIVSRTMKIIGHNINVMNGQGVILGSGDPKRIGATHEGALLAIAQNRNVE
LSEEVASGLHGVKPGINLPLHYQGQIIGVIGITGDPAELTHYGELLKMTAEMIVEQANQQ
DKLQWENRQREEFILQLIKAQTDDDEQLHRWAKQLDIDITLPRVAAIIEVSEKQPSAIHK
MISQVNTSTNNELSGSDERNPRVSETLKQVLHLLQNPDRGNLIAMTSMSQLVILKPAFLD
GKQWDPELENQRIDKLLQRLPAQMDLNFKIALGHFFPVKGGIARSYQTAQETLSLGKQLN
PEGTKYLFEDYSLQVLLSGLKHDWRGQALASPYQQLTQADKNGQLRKTLAAYITHFGDAQ
QCANALFIHRNTLRYRLDKIQQLTKTDIQSLHGLLSLYLGQLLDT
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtacgttttggatcaacacatcgccaaaaaaattgtgagtcgcacaatgaaaatcatt
ggacacaatatcaatgtgatgaatggtcaaggcgtgatcttaggctcaggagaccctaaa
cgtatcggtgcaacccatgagggcgctttactcgcgattgcgcaaaatcgcaatgtggaa
ttgagcgaagaagtcgcctccggtcttcatggcgtaaaaccaggcatcaacttacctttg
cattaccaagggcaaattattggtgtgattggcattactggcgacccggcagaactaacc
cactacggcgagctactaaaaatgaccgccgagatgattgtcgagcaagccaatcaacag
gataaattgcaatgggaaaaccgccagcgtgaagaatttattctgcaacttatcaaggca
caaaccgatgacgatgagcaattgcatcgctgggccaagcagctcgatattgatatcacg
ctaccacgagtggccgccattattgaagtcagtgaaaaacaaccctccgccatccacaaa
atgatatcgcaggtaaacacatcaacaaataacgagctaagcggtagtgatgagcgcaat
cccagagtcagcgaaaccctcaagcaagtattgcatctactgcaaaatcccgaccgcggc
aacctaattgccatgacctccatgtcacagctggtgatcctaaaacccgcttttctagat
ggaaaacaatgggatcccgagcttgaaaaccaacgtattgataagttattgcaacgatta
cctgcgcagatggacttaaattttaaaattgccttgggtcacttttttcccgtaaaaggt
gggattgcacgctcctatcaaaccgcgcaagaaacgttgagcttaggtaaacagctcaac
cctgaaggcacaaaatacctatttgaggattattccttacaagtgctgctctcaggactc
aagcatgactggcgcggccaagcgctagcaagtccctatcagcaactaacgcaggccgat
aaaaatggccaattacgtaaaactttagccgcctacatcacccactttggtgatgcgcag
caatgcgccaatgccctgtttatccaccgaaataccttaagatatcgtctagataaaatt
cagcaattaaccaaaactgatattcaatccttacacggcttattaagtctgtatctggga
caactgcttgatacttaa
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