Shewanella sp. FDAARGOS_354: CEQ32_08500
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Entry
CEQ32_08500 CDS
T04944
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shf03000
]
CEQ32_08500
Transcription factors [BR:
shf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CEQ32_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ASF15028
LinkDB
All DBs
Position
complement(1885999..1886910)
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AA seq
303 aa
AA seq
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MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKN
PDIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPL
SKPEDLKHHTLLHDMSRHDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFAEESRSEL
LPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgcttaccaccactgaatgcggttaaagcatttgaggccgccgcacggcat
ttgagctttactcgagcggctgaagaattgtttgtgactcaggctgcggtgagtcatcaa
attaaagcgctggaagattttctcggattaaaattatttcgccgaaaaaatcgttcactg
ctgctaaccgaggaaggccagagttattttctcgatattaaggacatctttattcaattg
gcagatgcgaccgataggctgctcgcacgtagtgctattggttcgttgaccgtgagcatg
tcgccaagctttgcgattcagtggctggtgccgcgtctgtccaagtttagtgaaaagaat
cctgatattgacgtacggatcaaggcggtggacacagaggccagttccttaactgacgat
gttgatgtcgcgatctattatggtttaggcaattggcctgggctgcgggccgataaactt
cgcaatgaagtgcttattccggtgtgttcacccatgctgttaaatggccctaagccgctg
tcaaagccggaagatttaaaacaccacacattgctacacgatatgagtcgccacgattgg
caggcgtggtttagacaatgcggtattaccgatatcaatgtgaaccaaggtccaattttc
agtcattcttccctcgtcttgcaggcggcagctcatggtcaaggtgtggcgttaggttat
agcgtgttggctcggcccgatattaaggcgggacgactggtatgcccattccaagaagtg
ctagtgagcaaagatgcttactacctcgtttgccaacagaatcatgccgagctgggtaaa
gtggtcgcgtttcgtgagtggatgttagatatgtttgccgaggagtcacgcagtgagttg
ttgcccggataa
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