Shewanella sp. FDAARGOS_354: CEQ32_09785
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Entry
CEQ32_09785 CDS
T04944
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_09785
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CEQ32_09785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA_16
KdpD
ABC_tran
AAA
AAA_24
RecA
NTPase_1
zf-LYAR
AAA_14
nSTAND3
Viral_helicase1
AAA_29
cobW
Zeta_toxin
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
ASF15246
LinkDB
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Position
complement(2170868..2172232)
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AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACHEWNTITEVRLGAASPGRGTQFAGYAGAGSSEV
KTLDQIDLNALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAEKM
PALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVELICEVALKESPKVIVVDSIQVMH
MSDVASSPGSVSQVRESASYLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMVV
WEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV
GGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVEAAKHG
FKRAIVPRANVPKKPPVGMEVVGVSKLSEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaaccgcgtacgtgtgcaatgagtgtggacaggattttccccgttgg
caagggcaatgcagtgcttgtcacgagtggaatacgataactgaagtgcgcttaggtgct
gcctcgcccggacgggggactcagtttgccggttacgctggtgcaggcagtagcgaagtc
aaaaccttagaccaaattgatctcaatgctttgccacgtatagtgagccactttggtgaa
ctcgaccgggtacttggaggcggcattgtgcctggatcggcgattttgattggcggccat
cccggagctggtaagagtactttgctgcttcagaccctatgccatttagccgagaaaatg
cccgcgctttatgttactggggaagaatcgctccaacaggtggcgatgcgggcccatcgt
cttggcttgccaaccaataaactgaggatgttatccgaaaccagtgtggagttgatctgc
gaagtcgccctgaaagaatcaccaaaagtcatcgttgtcgactctattcaagttatgcat
atgagcgatgtagcgtcgagtcccggcagcgtgtcgcaggtacgtgaatcagcctcctat
ctaacccgtttcgccaagcaaaatggcattgctgttattatggtgggtcatgtcaccaaa
gatggcagcctcgccgggccaaaagtgctcgagcactgtatcgattgctcggtgatgttt
gaaggggatagcgacagccgttatcgtactttgcgctcccacaagaaccgcttcggggcg
atcaacgagctgggcgtatttgccatgacggaacgtggcttgaaggaagtggctaaccca
tccgcaattttcctctcccgcggcgaggaagaatcctcgggctccttggtcatggtggtg
tgggaaggtacgcgcccgttactggttgaactgcaagtgctggtggataattctgccatg
tccaatccgcgccgcgtggcagtggggatggatgcaaaccgtttggccatgttgcttgcg
gtgatgcatcgccacggtggcttgcaaatgtcggatcaggacgtgtttgtgaacgtggtt
ggcggggttaaagtaaccgaaaccagtgccgacttaaccctgctactggctatggtatcg
agttttcgtggtgatattttaccgagtgatttagtggtgtttggtgaagtgggcttatct
ggcgaaattcgacctgtgccaaatgggcaagaacgtttagtcgaagccgctaagcatggt
tttaaacgagcgatagtgcctcgagcgaacgtgccgaaaaaaccgccagtgggaatggaa
gtggtgggcgtttccaaactatcagaagctcttgaagcaatctaa
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