Shewanella sp. FDAARGOS_354: CEQ32_10515
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Entry
CEQ32_10515 CDS
T04944
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_10515
Enzymes [BR:
shf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CEQ32_10515
Transfer RNA biogenesis [BR:
shf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEQ32_10515
Prokaryotic type
CEQ32_10515
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASF15371
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All DBs
Position
complement(2327444..2328397)
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AA seq
317 aa
AA seq
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MARRSKGRFIDGIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDSDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEFTEAQLMSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLL
LPMDTAVADFPEVNVPDASAAYLMQGQAVRVSGLVADTLVRITLGTERRFVGIGEMNQDG
LLAPKRLVVLHDQAKAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgttcgaagggccgctttatcgacggtattgtgttgttggacaaagccact
ggcatgagttccaactttgcattacaacgggtaaagcgcttttttaatgccaataaagcg
ggacacacgggggcgctcgatcctttggcaacgggcatgctacctgtgtgtttaggcgaa
gcgactaagttttcgcagcacttgctggattcggataagcgttatctggttaccgcaaaa
ctggggcaacgcactgataccagcgactctgacggtgaagtggtgcagactcgcccgctc
gaattcactgaggcgcagttaatgtctgccttagagcattttcgtggcgatacccagcaa
gtgccctccatgtattcggcgctgaaataccaaggccagcctttgtataagtatgcccgc
gaggggattgaagtgccgcgcgaggcgcgtccaatcactgtctttgaactgaacttcatc
ggtctagaaggcgatgagctgaccttagacattcattgttctaagggcacttatattcgc
actatcattgatgatttaggtgagatgctcggttgtggcgcccacgtgattatgctgcgt
cgtactcaagtcgcgcattatccctacgacaaaatggtcaccttggagcaactcgaagcc
ctagtcgctaaggcgcaggaggagcagcttgaccctagcagcttgctggactcgttgctg
ctacctatggataccgcggttgctgattttcccgaggtcaatgtgccggatgcgagtgca
gcttacttaatgcaaggtcaggcggtacgagtctcaggactcgttgcagatacattggtg
cgcattacgttgggcactgaacgtcgtttcgtcggaattggcgagatgaaccaagatggc
ttactggcacctaagcgcttagtcgtgcttcacgaccaagctaaagcatcttaa
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