Shewanella sp. FDAARGOS_354: CEQ32_11420
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Entry
CEQ32_11420 CDS
T04944
Name
(GenBank) cobalamin-binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CEQ32_11420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_11420
Transporters [BR:
shf02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
CEQ32_11420
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_2
OprB
Motif
Other DBs
NCBI-ProteinID:
ASF15520
LinkDB
All DBs
Position
complement(2513124..2513948)
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AA seq
274 aa
AA seq
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MLIRRIIILGVSLALLPISAIAEPAKRIIALSPHAVEMLYAIGAGETIVAATDYADYPEA
AKKIPSIGGYYGIQIERVLELNPDLIVVWDTGNKAEDINQLKNLGFKLYSSSPNTLEDVA
KEIEELGQLTGHVEQANQVATDYRRELLRLRNENAAKSEPKVFYQLWSTPLMTVAKNSWI
QQIIGVCHGQNVFYDAASDYPQVSLENVLLTLPEVILQSEEEGNVKGIDWRKWTEIPAVK
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgttaattcgacgcattattatcctaggtgtcagtcttgccctgttacctatatcagct
atcgcagagccagcaaaacgtattattgcgttgtctccccacgcggttgaaatgctttat
gccattggtgcgggagagacgattgtggccgccacagattatgcggattatcccgaagcg
gcgaaaaaaatccctagtattggtggttattatggtattcagattgagcgcgtattagag
cttaatcccgatctgattgtggtgtgggatacgggcaataaagccgaggatatcaaccaa
ctcaaaaacttaggttttaaactgtacagcagttccccaaacacccttgaagatgttgcc
aaagaaattgaagagttaggccaattaacggggcatgtggagcaggctaatcaagtggca
acggattatcgccgcgagctgcttcgactccgcaatgaaaacgccgctaaatctgagcct
aaagtgttttatcagttgtggtcgacgcccttaatgacggttgcgaaaaacagttggatc
cagcagattattggcgtgtgccatgggcaaaatgtcttttatgatgcggcgagtgattat
ccgcaggtgagtcttgagaatgtgctactgaccttgcccgaggtgattttacaaagcgaa
gaagaaggcaatgttaaagggattgattggcgtaaatggaccgaaatccccgccgttaaa
aaccagcatatttatcaattaaatgccgatttattacaccgcgcgacgcctagagcttta
cttggtgtaaaggccgtttgcgatgccttagataaggcacgttaa
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