Shewanella sp. FDAARGOS_354: CEQ32_11545
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Entry
CEQ32_11545 CDS
T04944
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CEQ32_11545 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shf01007
]
CEQ32_11545 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_11545 (lysS)
Enzymes [BR:
shf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CEQ32_11545 (lysS)
Amino acid related enzymes [BR:
shf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CEQ32_11545 (lysS)
Transfer RNA biogenesis [BR:
shf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CEQ32_11545 (lysS)
Prokaryotic type
Other AARSs
CEQ32_11545 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASF15544
LinkDB
All DBs
Position
complement(2550400..2551902)
Genome browser
AA seq
500 aa
AA seq
DB search
MTEQVQDENKLIAERRAKLDSIRPNCSANAHPNTFRRTHKAAELQEKYGQNTKEELEALG
FRTSIAGRIMAKRGPFLVIQDVSGRIQAYAEKGVQADLKERYQGLDIGDIIGVTGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVV
AAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKF
WTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVAN
GFSELNDAEDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagatgaaaacaaactgattgccgagcgtcgtgccaagctagac
agcattcgcccgaactgcagcgctaatgctcaccctaatacgttccgtcgcacccataaa
gcggctgagttgcaggaaaaatacggtcaaaacactaaggaagaactcgaagccttaggt
tttagaaccagcatcgctggccgtatcatggcaaaacgtggcccattcctggtgatccaa
gacgtgtctggtcgcatccaagcttatgctgaaaagggtgtacaggcagatctgaaggag
cgttaccaaggtctggatatcggtgacatcatcggcgtaactggtcagttgcacttgtct
ggtaaaggcgatctgtacgtgaacatggaagagtaccaactgctgactaaagcactgcgt
cctttgcctgaaaaattccacggcttaaccgaccaagaaacccgttaccgccaacgttat
gtggacttaatcgttaacgaagaatctcgtcaagccttcgtaatgcgttcaaaagtggtt
gctgcaatccgtaacttcatgatcaaaaaagagttcatggaagttgaaaccccaatgatg
cacgtgatcccaggcggtgcttcagcccgtccatttatcactcaccacaatgcgctggac
atgccaatgtacctgcgtatcgcgccagagttatacctcaagcgtttagtggtaggtggt
tttgagcgtgtgttcgaaatcaaccgtaacttccgtaacgaaggtttgtcgccacgccat
aacccagaattcactatgatggaattctatatggcctatgctgactacaaagatctgatg
gacttaaccgaagaactgttaagctctatcgcgattgaactgttaggcagcgcgcaaatg
ccatacggcgagcacacggtcgatttcggtggcccatatgcccgtttaagcatgttagaa
gcgattcagaagtacaatcctgacaacgcgactatccaagccatgacttacgagcaagtg
aaagatcttgaattcatgcgtgaactggctatcagcctaggcatcaagatcgagaagttc
tggacctgtggtcaactattagaagaaatcttcggtgaaactgctgaatggcagttaatg
caaccgaccttcatcactggctacccagcggacatttcgccactggcacgtcgtaacgat
gacaatcacttcattaccgaccgttttgaattcttcatcggtggccgtgaagtggctaac
ggtttcagcgaattaaacgatgctgaagatcaagatagccgctttaaggcgcaggttgat
gccaaagacgcgggtgacgacgaagccatgttctacgatgcagactatatcactgcgctg
gaacacggtttaccgccaacagcgggtcaaggtattggtatcgaccgtttagtgatgtta
ttcactaacactcacactatccgtgacgtgatcctgttcccagcgatgcgcccacaggct
taa
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