Shewanella sp. FDAARGOS_354: CEQ32_12920
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Entry
CEQ32_12920 CDS
T04944
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shf01002
]
CEQ32_12920
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
shf02042
]
CEQ32_12920
Enzymes [BR:
shf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
CEQ32_12920
Peptidases and inhibitors [BR:
shf01002
]
Metallo peptidases
Family M9
CEQ32_12920
Bacterial toxins [BR:
shf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
CEQ32_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
Motif
Other DBs
NCBI-ProteinID:
ASF15791
LinkDB
All DBs
Position
2868448..2871561
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AA seq
1037 aa
AA seq
DB search
MKQTLLFAAISLAIATPSLAHNHSQQDPNHSIQAKNTAIPSALAPLASPSAPLNFDVSHR
PLLPSNSLIASPNEPTHSEYLDAHSSQQQALLENSPRSKTSSFAANADCSNFVGKSGQAL
LDELTQSTPQCVGKLFNLKGSDASSVFSEANVSTVANAIAAKAPEYTGVDNQGIESHIYF
VRAALYVQFYNPSDVPAYSSAVKNNLKSALNALFANNTIWTLSDANASVLKEALILIDSA
ELGADFNFVTLKVLNDYNSTWQASFAMNAAANTVFTTLFRAQWNPDMQALFARDHAILDA
LNQFQLNHRDLLGTNAEYVLVNAVRELSRLYYIDAMRPKVTQLVKNILNSTSKNDPSKVL
WFAAAEMADYYDRSNCNAYQICGFKAQLAADSLPFNWKCSDSLKIRAQDLYQDQAKWACG
VLSQQESHFHTILETGMQAVAQDNNDDLELVIFGSSSEYQSLANSIFGINTNNGGMYLEG
SPAGLKNQARFIAYEAEWRRPDFHVWNLQHEYVHYLDGRYNLFGDFSRSVSANTIWWIEG
LAEYISYRDANPAAIAMGETGEFMLSTIFKNTYDSGQDRIYRWGYLAVRFMFENHRDDVR
QILTFLRNNQYAEYQAFMDSIGTRYDNEWRGWLTSGLSTTNNGIVDKGPSDEQANASGRE
GNWAGPTGTISKDYSPCQVSNEAYRYSESASLSLEVPMECIDAKQGRASFSFANTDRSAQ
DIWIKIGGGWGDADIYYDSRGWASAEKNQGYGIGNGNYQVIKVSLNPNEYWHYITLEGDF
GGVDMLVSTTELVADTDPDLGDGGDTGGEVPSNCGAATINYGKLTLGKDECISGGRNSFY
FWVDADNSQFSVSTTGGTGDANIYFNANTWASASNAQASSVNPGNKESFSFTANRGWRYI
TVDTTSEFSGVNFNLKAGGGSSVPNQIANACATKSPVSYTQLTPGDAVCSANGRNDYYLW
IPEGTSQLEVRSAHGTGDVSLYSGRSWANAQQYEAASTNAGSTTEQIKVNNPSAGWYYIT
LQSEGQSTGVALQVDLR
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaccctacttttcgcggctattagcttagccatcgctacaccctcgctcgcc
cataaccattcacaacaagatccaaaccattcaatacaagcgaaaaacacagcaatccct
agtgcgctagcaccgttagcttcgccgtcagcgccactcaattttgatgtcagccatcgg
ccgttattacccagcaacagcttgatagcctccccaaacgagccgacacactctgagtac
ctcgatgcacattcttcacaacagcaagcgttgctcgagaactctccgagatcaaaaacc
agcagctttgccgccaatgccgactgtagtaactttgtcggtaaatcgggccaagccctg
ttagatgagctaacgcagtccacaccacagtgtgtcggtaagctatttaatctcaaggga
agtgacgcaagcagcgtatttagtgaggcgaatgtatccacagttgctaatgcgattgcg
gccaaggcgcccgaatacactggcgtggataaccaaggcattgagtcacatatttacttt
gtgcgcgccgcgctttatgtgcagttttacaaccctagcgacgtgcccgcctacagcagt
gcggtgaaaaacaatttaaaatcagcgcttaatgcgctttttgccaataacaccatttgg
acactctccgatgccaatgccagcgtgctcaaagaagcactgatcctgattgattcggct
gaactgggggctgattttaactttgtcaccctcaaagtgctcaatgactacaacagcaca
tggcaagccagctttgcgatgaatgcggccgccaataccgtgtttaccaccttattccgc
gcccagtggaatcctgacatgcaggcgctgtttgcccgagatcatgccattttggatgcg
ctcaaccagttccaacttaaccatagggacttactcggcaccaatgctgaatatgtttta
gtcaatgctgtcagagagttatctagactgtactacattgatgccatgcgccctaaagtg
acccaattggtcaaaaatatcttaaatagcaccagcaaaaatgatcccagtaaagtgctg
tggtttgctgccgccgagatggcagattactacgatcgcagcaactgtaatgcttatcag
atctgtggtttcaaggcgcaattagctgccgatagcttaccgttcaattggaaatgctcc
gacagcctcaagatccgcgcccaagatctttaccaagatcaagcaaaatgggcatgcgga
gtattaagtcagcaagaaagccatttccacacgatactcgaaacgggaatgcaggcggtc
gcacaggataacaatgatgatttagagctggtgatttttggcagctcgtcagaatatcaa
tcccttgccaacagcatttttgggatcaataccaacaatggcggcatgtatttagaaggc
tctcccgcaggacttaaaaaccaagcgcgctttattgcctatgaggccgaatggcgtcgc
ccagattttcatgtgtggaacttacagcatgaatacgtgcattaccttgatggtcgctac
aacctgtttggcgacttcagccgcagcgtatccgccaacacaatttggtggattgaagga
ttagcggaatatatttcgtaccgagatgccaaccccgctgccatcgccatgggtgaaacg
ggcgagtttatgctctcaaccatctttaaaaacacctatgactctggccaagaccgcatc
taccgttggggttacctcgccgtacgctttatgtttgaaaatcaccgcgatgatgttcgc
cagatcctaaccttcctgcgtaataaccaatatgctgaatatcaagcatttatggattcc
attggcacccgctatgacaacgaatggcgcggctggctcaccagcggtttaagcaccacc
aacaatggtattgtcgataaaggcccaagtgatgaacaggctaatgccagtggtcgcgaa
ggcaactgggcaggcccgactggcaccatcagcaaggattactcaccctgccaagtcagt
aacgaagcataccgctatagcgagtctgccagcctcagtcttgaggttcccatggagtgt
attgacgccaaacaaggccgagccagctttagctttgccaatactgaccgctcggctcag
gatatttggatcaaaattggcggtggttggggtgatgccgacatttattacgattcaagg
ggatgggcaagtgctgaaaaaaatcagggctatggcatcggcaatggtaattaccaagta
atcaaagtgagcctaaacccgaatgagtattggcactatatcaccctagaaggggatttt
ggtggtgttgatatgctagtgagtaccacagaattagttgccgataccgatcccgattta
ggtgatggtggcgatacaggcggtgaagtgcccagcaattgcggtgccgcaaccatcaat
tacggcaagttaaccctcggaaaagatgaatgtattagcggcggccgtaatagcttttat
ttctgggtcgatgctgacaacagccaatttagtgtcagcacaaccgggggaacaggcgat
gccaatatttactttaatgccaatacttgggcaagcgcgagcaatgcccaagccagcagt
gtaaatccaggcaacaaagagtcctttagctttacggcaaaccgtggctggcgatatatc
actgttgataccacgagtgaatttagtggcgtgaacttcaaccttaaagccggtggtggc
agtagcgttcctaatcaaattgccaatgcctgtgcgactaaatcacccgtgagctatacc
caactcacgccgggtgatgccgtctgcagcgccaatggccgtaatgactattacctttgg
attcctgaagggacaagccaactagaagtacgctcggcccacggaactggagatgtcagc
ctttactcgggtcgcagctgggccaatgcccagcaatatgaagccgcctcaacaaacgct
ggcagcactacggagcaaatcaaggtcaataatcccagtgctggctggtattacattacg
ctccaaagtgaaggccaaagtacaggtgtggcccttcaagtagatttacgttaa
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