Shewanella sp. FDAARGOS_354: CEQ32_13180
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Entry
CEQ32_13180 CDS
T04944
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22051
miniconductance mechanosensitive channel
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_13180
Transporters [BR:
shf02000
]
Other transporters
Pores ion channels [TC:
1
]
CEQ32_13180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
ASF17649
LinkDB
All DBs
Position
2924496..2927699
Genome browser
AA seq
1067 aa
AA seq
DB search
MPRILLFVIAFLSFSLHANSPLQLDKRLGLNNQNQQQNISIDDQIVELKNNIDRLAANAS
SFQQAQLDFEKNKKVIDQGLKEATKPLKLDKGTDLNQQASMAYLRLSELKESEAALGNQV
NELLQRHNLLPSVIANARQNVLQNKKTELAPIDTPAGELQQIQRIFFEQSLATHEAELAS
SQKRIELTQLQLQLVRQQLSQQEAFIETINKAINKQRQQQTDATLAKNLVDTTKVIDPIT
RNIADTNQIYGQKLQTLTLQINNVVEQQEQAELQYQSQAKQLANIQEQITWVKMNSAFGE
RFLQMLQSLPKPPNHEKLQTLIADARLDRYHLEQQQALNEQELEQANLYNEGQIKLLRSQ
QALLTQLMQSYDQYLSELGKLKVNYQQLSQQHLTLKNTLNEHLFWVPNAASINKLWLTDI
QRSALWLIQQAQWGQLSKAWQEQNDYWSWWIILLVLCLVVQDLIKPKFNRLLGNYATYVG
NVTQDKFIYTFKSLVLSLGYALIKPLPIVAAGWIFYQSDRNFVQAVGMGILAIGLVYLLY
RLIFILALDKGVLVGHFKRPSKLIQAGQLRLKHFVFVASPLLGIMGFTEILDASLIRNSI
GRGAFICFCVVLFLLYKDILLLSRQNSVAQKEGKNKRLIQKLLWALLIAVPLLSAGLAFR
GYYFTAFQMLLQLQLSIILGLSFLLLYQLIKRWMLIERRRIAFDRAKAKRAERLAQREKG
ETHHSSNDGLDTYEEPVVDLETISSQSLGLVRSLLLLAFLASLIGLWTQTHTALFSFLDG
ITLWTTNTSVNGVEQQLPITMKSLLFGLIIVGFSLMIATNLPGLLELMILQRLDLTPGTG
FAITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLIILF
EKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITR
VIVYVSVARDSDPAKVEATLYQAVQECEDALPNPEPEVWFAGFGKHTQDYEVRAYAKDMS
ARWPLRHDLHKRITRKLKENNLELAYPQMEIHIKNGQTRDQVGIIRS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtattttattgttcgttattgcttttttgtctttttctctccatgctaattcg
cccttgcaattggacaagcgtcttggcctaaacaaccaaaatcagcaacaaaatattagc
attgacgatcaaattgttgagcttaaaaacaacattgacagactggcggccaatgcgagc
agttttcagcaggcgcagctggattttgaaaaaaataaaaaggtcatcgatcagggctta
aaagaggccactaagccattaaagctggataaaggaacagatcttaaccagcaagcctcg
atggcttatttgcgcctatctgagttaaaagagagcgaggcggctctcggcaatcaagtc
aacgaactactacagcgccataatctactgccttccgtcattgccaatgcaagacaaaat
gtgctgcaaaataaaaaaacggaattggcgcctatcgatacgccagcgggtgaattacaa
caaatacagcggattttcttcgaacagagccttgccacccatgaggccgagcttgccagt
agccaaaagcgtatcgaacttacccagctacagttacagttagttcgccagcaattgagc
cagcaagaagcctttatcgaaactatcaataaggcgatcaacaagcagcgccaacaacaa
accgatgccacgctggccaagaatttagttgataccactaaagtcatcgatccgattaca
cgcaatatcgccgataccaatcagatctacggccaaaaactgcaaaccttaaccttgcaa
atcaataacgtggtagagcagcaagaacaggctgagctccaatatcaatctcaagccaag
caacttgctaatatccaagagcaaattacttgggtcaaaatgaactccgcctttggcgaa
cgctttttgcagatgttgcaatcgctgcctaagccgccaaaccatgaaaaactacaaact
cttatcgccgatgcgcgtctcgacagatatcacctagagcaacagcaggcgctcaacgaa
caagaactcgaacaagccaatctctataatgaggggcagattaagctgctgcgctcacaa
caagcattgctgactcagctaatgcagagttatgaccagtatttgagtgaactaggcaag
cttaaagtgaattatcagcagcttagccaacagcacctgacgctaaaaaacaccctaaac
gaacatctattttgggtacctaatgccgcgagcattaacaagctctggctcaccgatatt
caacgtagcgccctatggctaatccaacaggcacaatggggacaactgagcaaagcttgg
caggagcaaaacgactattggtcatggtggatcattctgctagtgctctgtttagtggtt
caagatttaataaaacctaaattcaatcgattactcggcaactatgcaacctatgtaggt
aatgtgactcaggataaatttatttataccttcaaatccttagtccttagcctaggttat
gccctcatcaaaccgctacccatagtggcagcaggatggattttctatcaatcagaccgt
aactttgtgcaagcggtcggcatggggattttagcaataggattggtttacctattgtat
cgattgatttttattcttgctctagataaaggcgtattggtaggccacttcaaacgcccc
tcaaaactgattcaggcaggccagctcaggctcaaacactttgtatttgtcgccagtccc
ttgcttggcattatgggctttaccgaaatactcgatgcctcgcttatccgcaacagcatt
ggccgcggcgcatttatctgtttttgtgtggtgttattcttgttatacaaggatattttg
ctattaagccggcaaaatagcgttgctcaaaaagaggggaagaacaaacggctgatccaa
aaattgctctgggcattgttgatcgctgttcccctgctgagcgctgggctcgcctttagg
ggctactacttcaccgcattccaaatgctgttgcaattacagctatcgatcatattggga
ttaagctttttactgctctatcaattaattaaacgttggatgttgattgagcgccgccgc
attgccttcgaccgcgcgaaagcgaaacgggctgagcgtttagcccaacgggaaaagggc
gaaacacaccatagctccaatgatggcttagatacctacgaagaacccgtagtcgacctc
gaaaccatttcgagtcagtcccttggattggtgcgttccttattgctactggcgttttta
gccagcttgattggcctgtggacgcaaacccatacggcgctgttttccttcttggatggc
atcaccctctggaccaccaataccagcgtcaatggtgtcgagcagcagctccccatcacc
atgaaatcgctgttattcggcttaatcatcgttggcttctcgctgatgattgcgaccaat
ttacccggtttgcttgagctgatgatcctacagcggctcgatttaacacccggtactggc
tttgccatcaccacagtaagtcgttacttagtggtgtttttaggcctgttgattggtttt
tcgaatctcgggatggaatggtcaaaactgcaatggttgattgccgccttgtcactgggt
ctaggttttggtttgcaggagatttttgccaactttatctcgggcctgattattctgttc
gaaaagccagtgcgtattggcgatacggtgacaatccgcgatctcaccgggactgtgagt
aaaatccagatccgtgccaccaccattatcgattgggacagaaaggaaattatcattcct
aacaaggcttttattaccgagcaattgattaactggtcgctgtcggatcctattacccgt
gtcattgtttatgtgtcggttgcccgcgattcggatccagcaaaagtggaagccacgctt
tatcaagctgttcaggaatgcgaagatgcgttgccgaatccagagccagaagtgtggttt
gctggctttggtaaacatactcaagactatgaagtacgagcctatgcaaaagatatgtcg
gcacgctggccactacgccacgatctgcacaaacgtattacccgtaagcttaaagaaaac
aacttggaactcgcctatccgcaaatggaaatccatattaaaaatggccaaactcgcgat
caggtcggcataatccgcagttaa
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