Shewanella sp. FDAARGOS_354: CEQ32_13800
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Entry
CEQ32_13800 CDS
T04944
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_13800
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CEQ32_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
AAA_25
AAA_30
AAA_10
TrwB_AAD_bind
AAA_16
T2SSE
CbiA
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASF15951
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Position
3060395..3061888
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AA seq
497 aa
AA seq
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MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFLTDIKGD
ISGLGVAGTPNDKLLKRAAEIGIVDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGR
ILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVADERKDISAKYGLISAQSLAA
IQRSVLGLARDGGNDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQ
FPDDIPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVSNPKLVVSEVISQLAVGEAL
VSTLADKGVPTMVERTLIAPPRCRMGPATTEELTAIRHQSPIGGKYDTLVNRESAYERLN
QRHTEQTNGSSTAQTTSTPTTKAAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
QILRGLLGGILGKSTRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgaatactctactcttaggtaaaggtgagcaacaggttcacttaaatcttaaatatgcc
aaccgccacggactgatcgctggcgctacaggtacaggcaaaaccgtttcgctgatgacg
ctagccgaaggcttttcccgccaaggtgtacccgtctttcttactgatatcaaaggcgat
atttcaggactcggtgtcgcaggcacaccaaacgacaagctattgaagcgggcggcagaa
atcgggatagtagattatcaaaccgaggcaaaccccgtcgtttgctgggatttggcagga
gagcaaggtcatccattacgcacaaccgtgagtgaaatggggccgaccttactcgggcgc
attctcgagctcaatgacacccaaagcagtattttagacatagtgtttcaactggctgac
gaccaaggtttattgttactcgacctcgacgatttgcgcgccatgctcaacttagtggcc
gatgagcgcaaagacatctcagccaaatatgggcttatcagcgcccagtcccttgctgcc
attcaacgctcagtgcttggtttagcgcgcgatgggggtaacgactttttcggcgaacct
gcacttcaactcgaagacttgatgcgcactaatttgcaagggcgcggcattatcaacctg
ttagccgccaataaactcatcttgacccctagcctctattccagcttcttactctggctg
ctatcagaactgtttgaaaatttacccgaagtcggcgatctcgataaacctaaattagtc
ttctttattgatgaggcacacctattatttgagggctgcccagcaagtttgcttaaacgc
atagagcaaattatgcggcttatccgctccaagggcgtcggggtatatttctgttcgcaa
tttcccgacgacattcctaacgagatcttaggtcagctcggcaatcgcattcagcatgcc
ctcagggcgtataccccaagggatcaaaaagccgttaaaaccgcagccgaaacctttgta
tcgaatcctaaattggtggtcagcgaggtaatttcacaactcgccgtgggcgaagcatta
gtgtcaacccttgccgataaaggtgtgccgactatggttgagcgcaccttaatagcacca
ccacgctgccggatggggccagccacgaccgaagagttaaccgctatccgtcatcagagt
ccgattggtggtaaatacgataccttagtcaatcgtgaatccgcctatgagcgactgaat
caacgtcataccgaacaaacgaatggcagcagtactgcgcaaacaaccagtacgccaacg
accaaagcagctgagcaaggctggtttagcgagcttatctttggtaataaacgccgccaa
ggattagccgaaaccttgtcgaaacaagcggcaagaaccgttggtaatcaactcggaaaa
caaattttacgcggattactcggcggtatactgggaaaatcgactcgcaggtaa
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