Shewanella sp. FDAARGOS_354: CEQ32_14315
Help
Entry
CEQ32_14315 CDS
T04944
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00640
Propanoate metabolism
shf01100
Metabolic pathways
shf01120
Microbial metabolism in diverse environments
shf01200
Carbon metabolism
Module
shf_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CEQ32_14315 (prpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
ASF16046
LinkDB
All DBs
Position
3186973..3188166
Genome browser
AA seq
397 aa
AA seq
DB search
MSNKLFPPQIKVAATYMRGGTSKGVFFRLQDLPEAAQVPGPARDALLLRVIGSPDPYGKQ
IDGMGGATSSTSKTVILSKSSQVDHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAIS
NGLIDAARIPQNGICTVRIWQANIAKTIIAHVPITDGMVQETGDFELDGVTFPAAEVQIE
FMNPAADEDGDGGSMFPTGNLVDVLEVPGIGSFNATMINAGIPTIFINAEDLGYSGTELQ
DDINSDNAALAKFETIRAYGAVRMGLITHIDEAASRQHTPKVAFVAKPKNYVSSSGKAVA
AEEIDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGEKEAVRFGHPSGTL
RVGAQAMQQNGEWTVTKAIMSRSARVLMEGFVRVPTV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaacttttcccgccccagattaaagtggctgcaacctatatgcgcggtggc
acgagcaaaggggtatttttccgtttacaggacttacccgaagcagcccaagtacccggc
ccagctcgagatgcactactgctgcgcgtgattggcagtcccgacccctatggtaaacag
attgatggtatgggcggcgcaacttccagcaccagcaagacggttattctgtctaaaagc
agccaagtcgaccacgatgttgactatctgtttggccaagtgtctatcgacaaacccttt
gtggattggagcggtaattgcggcaacttgaccgccgccgtcggcgcctttgccatcagc
aatgggctgattgatgctgcgcgcatcccgcaaaacggtatctgcaccgtgcgtatttgg
caggccaatattgcaaaaaccattattgcccatgtgccgattaccgatggcatggtgcaa
gagacaggcgattttgagctcgatggcgtgaccttccccgccgccgaagtgcagatcgaa
tttatgaaccccgccgctgacgaagacggcgatggtggcagcatgttcccaacgggtaat
ttagtggatgtactcgaagtacccgggattggcagctttaatgccaccatgattaacgcg
ggtatcccaaccatctttatcaatgctgaggacttaggttactcgggcactgaactgcaa
gacgatatcaacagcgataatgccgctcttgccaagtttgagaccatccgtgcttatggc
gccgtacgtatgggacttatcacacatattgatgaggccgcatcacgccaacatacccct
aaggtggcctttgttgctaagccgaaaaactatgtgtcatccagcggcaaagcagttgca
gcggaggagatcgatcttctggtacgtgccctctccatgggcaaattgcaccatgcgatg
atgggcacagccgccgtagcgattggtaccgcggcggcgattcccggcactttagtcaat
ctcgcggcaggcggtggtgagaaggaagcggtacgttttggccatccttctggcaccctt
cgcgtcggcgcacaggccatgcaacaaaacggcgaatggacagtgactaaagccattatg
agtcgcagcgcccgagtgctgatggaaggttttgtacgcgtgcccaccgtataa
DBGET
integrated database retrieval system
