Shewanella sp. FDAARGOS_354: CEQ32_14540
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Entry
CEQ32_14540 CDS
T04944
Name
(GenBank) site-specific integrase
KO
K14059
integrase
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CEQ32_14540
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Gene cluster
GFIT
Motif
Pfam:
Arm-DNA-bind_2
Phage_integrase
Phage_int_SAM_3
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
ASF16091
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Position
complement(3240800..3241978)
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AA seq
392 aa
AA seq
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MGTVNSRDGKLYLDFRYKGVRCREQTSLADTPANRQKLNKLLLMLEQQMKAGSFDYRHHF
PNSPKVEHFTQLAKLSQFHAAGGRMLFSAFANLWLDEKRVEWRESQIETVEGILRCHLIP
AMGTKMIATICKQDILGLRLSLCEVDALTNRSLSASRINHIMTYLRLILNEAAERFGFQT
PWRNIKALPMPRTDIQPFSLVEVYRIIEGVRDDFRPYYTVRFFTGMRTGEIDGLTWENID
FTNRLIHIRQSLVRGSLGLTKTSSSDRAIAMNQPVYEALQAQSKLTKIRSKFVFCNRRGD
ALSHRNVTKRVWYPLLESLALEKRNPYQTRHTAATLWLAAGESPEWIARQLGHANTGMLF
RVYSRYVPNLLGQDGAAFERLIGNGPKGESSK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgtaaatagccgagatggcaaactttatctagattttcgctataagggtgta
cgttgccgagagcagaccagtcttgccgatactccggcgaatcgacaaaaattaaataaa
ctgttgttaatgctggaacagcaaatgaaagctggttcatttgattatcggcatcatttt
ccaaatagccctaaagtcgaacacttcactcagttagctaaactcagtcaattccatgct
gctggtgggcgcatgttgtttagtgcctttgctaatctttggctggacgagaagcgggta
gaatggcgcgagagtcaaattgagacggtagaggggatcttaaggtgtcacctcataccc
gcaatggggactaagatgatagccactatctgtaagcaggatattctgggtttgcgtcta
agtctttgtgaggtcgatgcactcacaaatcgctcgctgtcagcttcaagaatcaatcac
atcatgacttatttacgattaatcctaaatgaggctgctgagcgctttggttttcagacc
ccttggcgaaatatcaaagcgttacctatgccgcgaacggatattcaaccattttcgttg
gtagaggtatatcggattatcgagggtgtaagagatgattttcgcccttactacaccgtt
cgattttttacaggtatgcgcacaggggaaatcgatggtctgacgtgggaaaatattgat
tttacgaacagattgatccacatccgccagtcattagttcgtggcagccttggcctaact
aaaacgtcaagttcagaccgcgcgattgcaatgaatcagcctgtatatgaagcacttcag
gcccaaagtaagctaaccaaaattcggagcaaattcgttttttgtaaccgccgtggagac
gcactgagccatcggaatgtgaccaagcgtgtttggtatccactgctagaaagtttggca
ctcgaaaagcgaaatccttaccagaccagacacactgctgcaaccctgtggcttgcagca
ggagagagcccagaatggattgctcggcagttaggacatgccaatacggggatgttattt
agagtgtattctcgctatgtacctaatttattagggcaagatggcgcagcgtttgaacgg
ttgattggtaatggtccaaaaggggagtcgtcaaaatga
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