KEGG   Shewanella sp. FDAARGOS_354: CEQ32_14595
Entry
CEQ32_14595       CDS       T04944                                 
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
shf  Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:shf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shf02048]
    CEQ32_14595
Enzymes [BR:shf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CEQ32_14595
Prokaryotic defense system [BR:shf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CEQ32_14595
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 AAA_19 UvrD-helicase SLFN-g3_helicase Prominin
Other DBs
NCBI-ProteinID: ASF16101
LinkDB
Position
complement(3257007..3260525)
AA seq 1172 aa
MADEKDIFSNFSFLREHDPVFFELAYGAERSFSADPNTTLVKLRQLAEALTQDIAARCHL
KFDQQTTQADLLFLISRELQLEPLILNLFHGLRKAGNVAVHQFRTRHKEALAGLKVARDL
AVWFHRNFAKGAESFSPGPFITPKDPSAELTQLQDHIAQLKNQLLEANCQLEQNAELTGL
LKREKAEYQQLAELMNAESRLLADQAKAHEAELKHQQQQFEHRLAELQTQLKNQTEEAAT
KQQTDIKQLSSKVKRVSKSITLDEESTRMLIDMQLIEAGWEADSILLDYRKGARPQKGKN
LAIAEWPTQGGQRGRADYVLFVGLIPIAVVEAKRENINVAGAIPQAERYSKGFVFGSLPG
PWLLEERNTPWSIDSDMFFIPFVYSCNGRPFVKQLAEQSGTWFRDVRSGANLARALQSFH
SPDGLVDLLKRNRLDAEAKLKQEGFGYLKLRPYQQRAIEKVEIALEAEQRECLLAMATGT
GKTRTIIGLMYRFLKTERFKRILFLVDRTALGEQAIDAFKEAKLEQNKTLSTIYNIAELG
DMAAEAETRVQVATVQAMVKRIFASDEPPTVDEFDCIIVDEAHRGYTLDQDMTDGEIETR
DATQYLSSYRRVLEYFDAVKIGLTATPAKHTSEIFGKPVYLYSYREAVAEDWLIDHEPPI
RYETLLTQNGINFVKGETVTSIDMSTGTIESAELDDELNFDVNAFNKRVISENFNRVICK
ALVQELDPFGEEKTMIFCATDLHADMVKRILDEEFQALYNGDYNQAAVAKITGKSDKVTE
LIRRYKNERYPNIAITVDLLTTGIDVPKICHLVFMRRVKSRILYEQMIGRATRRCDDIGK
TVFKIYDPVDIYAALAEVNTMKPLVKNPNITIEQLIDELTDETLLIKALQAPGDEAGESQ
ADTVLSQLSQKLMRVLRKAENKAERYPALKQKLIELGNVWGVEPGKLHQHLHSIGPQQAS
QFLKQHGTLIAQLEQVQALIGSEYRPVISYHEDELTLREQAYGGRSRPEDYLSDFESYIR
ERINQHAALMTVVNRPKDLTREQLKEIRMLLDGAGYSETNLKTAWRGKTNHEIAAGIIGH
IRRAALGEPLVSFDERVAKAMHKIYALHNWNPNQRKWLDRLAKQLVHEAIIDRETINQTP
AFEGGAKRLNQILDDQLDTVLEELGEFLWEAV
NT seq 3519 nt   +upstreamnt  +downstreamnt
atggctgacgaaaaggacatttttagtaacttctcttttcttagggagcacgacccggtt
ttttttgagcttgcctatggtgctgagcgttcattttctgcagaccccaataccactctt
gtcaagttgaggcaattggctgaggccttaacgcaagatattgctgcgcgttgccatcta
aaatttgatcaacaaactacacaggccgacttactgtttttgattagtcgagaactgcag
ctagagcctttaattcttaatttgttccatggcctgcgtaaagctggcaatgtggctgta
caccaattcagaacccgccataaagaggctctcgcaggtttgaaagtggcgcgggacttg
gctgtatggtttcaccgtaattttgcaaaaggtgccgagtctttcagtccagggcctttt
atcacgcctaaagatcccagtgccgaattaactcagttgcaagatcatattgctcagctg
aaaaaccaattactcgaagcaaattgccagcttgagcaaaatgcagagcttacggggctt
ttgaagcgggaaaaggctgaataccagcaattggcagagttgatgaatgctgagtctagg
ttgttagctgaccaagccaaggctcatgaagctgagctcaaacaccagcaacagcagttt
gaacatcggttagctgaattacaaacgcaactgaagaaccagactgaagaggctgcaacc
aaacaacaaactgacataaagcaactgagcagtaaggttaagcgggtttcaaaatcaata
acgctggacgaagaaagcacccgaatgcttattgatatgcagctaatagaagcaggctgg
gaggctgattctattcttttggattatcgcaaaggtgctcggcctcaaaagggtaaaaat
ttagccatcgcagagtggccgacccaaggtgggcaaaggggacgagctgattatgttctg
tttgttggtttaatacctatcgcagttgtggaagcaaaacgtgaaaatatcaacgttgca
ggcgctattccgcaagctgaacgctatagcaaaggttttgttttcggtagcttgccaggg
ccttggctacttgaagagcgcaacacgccttggtccatcgatagcgacatgttctttatt
ccttttgtatattcctgtaacggcagaccctttgtaaaacaacttgcagagcaatctgga
acttggtttagagatgttcgcagtggtgcaaatcttgcccgagcgctgcaaagtttccat
tctccggatgggcttgttgatttgcttaaacgtaaccgcttagatgccgaagctaaactt
aagcaagaaggttttggctacttgaagcttcgtccttatcagcaaagagccattgaaaag
gtggaaattgcgctcgaggctgagcagcgtgaatgtctacttgccatggcaactggcacg
ggtaaaacgcgtaccatcatcggattgatgtatcgctttttaaaaaccgagcgattcaaa
cgtattctgtttttagtggatagaaccgccttgggtgaacaggccatcgatgcttttaaa
gaggctaaacttgagcagaacaaaaccctgtccacgatatacaatattgccgaactgggt
gatatggctgcagaggctgaaactcgtgttcaggtcgccacagtgcaggccatggttaag
cgcatcttcgctagtgatgagcctcctactgtggatgagtttgattgtatcattgtggat
gaagcccaccgaggctatacccttgatcaagatatgactgatggtgaaatcgaaacccgc
gatgccacccaatacctctcaagttaccgccgagtacttgaatattttgacgcggtaaaa
ataggccttactgctacaccagctaagcatactagcgagattttcggtaagcctgtctat
ctgtattcttatcgtgaagcggtggcagaagactggctgatcgaccatgagcctcccatc
cgttatgaaacactactgactcaaaacggtataaacttcgtgaaaggcgaaaccgtcaca
tcaattgatatgtcaactgggactattgagtctgcggagcttgatgatgaattgaatttt
gacgttaatgcttttaataagcgggtcattagtgagaattttaaccgagttatctgtaag
gcattagttcaggagttagatccatttggtgaagagaaaaccatgattttctgcgccacc
gacctgcatgctgatatggttaagcgtattttggatgaagagtttcaagctctctataac
ggcgattataaccaagccgcagtggctaaaattactggaaaaagcgataaagtgactgaa
cttattcgccgttataaaaacgaacgctaccccaatattgctatcacagtagacctgctt
actacaggtattgatgtacctaaaatctgtcatttagttttcatgcgccgagttaaatcg
cgtattttgtatgaacaaatgatcggacgagcgacgcgacgttgcgatgatattggcaag
actgtatttaaaatttacgacccagttgatatttatgcggcgttagctgaagtgaatacc
atgaaaccgctcgtaaaaaatcccaatatcaccattgagcaattgattgatgaactaacg
gacgaaacactgctcattaaggcgctacaagctccaggcgatgaggctggtgagtctcag
gccgatacagtgcttagtcaactcagtcaaaaactgatgcgagtattgcgtaaggctgaa
aataaagctgagcgttatccagctcttaaacagaagctaattgagcttggcaatgtctgg
ggtgttgaaccaggaaaattacatcaacatttacacagcataggtcctcagcaagcgagt
cagtttcttaaacaacatggaacgctgatcgctcagttagaacaagtacaagctctcatt
ggaagcgagtatcgacccgttatctcctatcatgaagatgaactgacgctgcgtgaacaa
gcctatggtggtcgtagtagacctgaagactatctgagtgattttgaaagttacatccgt
gagcgcataaatcagcatgccgcactaatgaccgttgttaatcgtcctaaagatctcact
cgtgaacagcttaaagaaattcgtatgctgctcgatggtgcaggttacagtgagaccaat
cttaaaacagcttggcgtggtaaaactaaccatgaaattgcagcggggatcatcggccat
attcggcgtgcagcattgggagaaccgttggtttcattcgacgaacgggttgccaaagca
atgcataaaatttatgcattgcataattggaatccgaatcaacgcaagtggcttgatcgt
cttgccaaacaattggttcacgaagcgattattgatagagaaacgattaaccagactcct
gcattcgaaggaggagccaaaagacttaaccaaatattagatgatcagctagatacggta
ttggaagagttaggtgagtttttatgggaagcagtataa

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