Shewanella sp. FDAARGOS_354: CEQ32_16030
Help
Entry
CEQ32_16030 CDS
T04944
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf03030
DNA replication
shf03410
Base excision repair
shf03420
Nucleotide excision repair
shf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ32_16030
03410 Base excision repair
CEQ32_16030
03420 Nucleotide excision repair
CEQ32_16030
03440 Homologous recombination
CEQ32_16030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shf03032
]
CEQ32_16030
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_16030
Enzymes [BR:
shf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ32_16030
DNA replication proteins [BR:
shf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CEQ32_16030
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CEQ32_16030
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEQ32_16030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASF16362
LinkDB
All DBs
Position
3590129..3592897
Genome browser
AA seq
922 aa
AA seq
DB search
MPTIANNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAV
VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGT
IARQASRENRAVLISTGDKDMAQLVDDNITLINTMTDTIMGPEEVAAKYGVGPDRIIDFL
ALMGDKADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNA
DMLKLSYELATIKTDVELEHDWHELTAKPADRDELIKCYGEMEFKRWLAEVLDNKAPTTL
AVKAETTETQEESAPSVTIETQYDTILTEAQLDEWIAKLKQAPLMAVDTETTSLDYMVAE
LVGMSFAVEAGKAAYLPLAHDYVGAPQQLDKQTALEKLRPLLEDAKIKKVGQNLKYDISV
LANAGIKLQGVVFDTMLESYVFNSIASRHDMDGLALKYLGHKNIAFEDIAGKGAKQLTFN
QIPLETAAPYAAEDADITLRLHQHLWPRLEKEAELASVFTDIELPLIQILSDIERQGVFI
DSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLFFEKLGYPVIKKTPKGAP
STAEEVLVELALDFPLPKVILEHRSLTKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATG
RLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIELRIMAHLSQDAGLLKAF
AEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQTY
IDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAP
MQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVDADKAEKLKLKVCELMAK
AANLDVELLAEAGIGDNWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccatagccaataacccacttgtccttgtggatggatcttcttatttatatcgc
gcctattatgcgcctcctcacctgacaaactcaaagggcgaagctactggtgcagtttat
ggcgtagtaaatatgctccgcagcttattaagtcgttatcaacctagtcatatcgctgtg
gtgttcgatgctaaaggtaaaaccttccgcaatgacttatatgaagaatacaaggcgcat
cgaccaccgatgccggatgacctgcgctcacaaattgaacccctgcaccgtattatccgt
gccttaggcttgcccttaatctctatcccaggtgttgaggcagatgatgttatcggcact
atcgctcgccaagcgagccgcgaaaaccgcgccgtactcatcagtacaggcgataaagat
atggcgcagctggttgatgacaatatcacgctgatcaacaccatgacagataccattatg
ggccctgaagaagttgcggctaaatatggtgtaggtccagacagaattatcgatttctta
gcgctgatgggcgataaggcggataacattcccggtttacctggtgttggcgaaaaaacc
gcattagcgatgctcacaggggcgggtagtgtcgccaatttgcttgcagagcccgaaaaa
gtcaccgaattaggctttaggggcgcaaaaaccatggcggcgaagatcatcgacaatgcc
gacatgctaaagctgtcctatgagcttgccaccattaaaaccgatgttgaactcgaacat
gattggcatgagctcaccgccaaacctgctgatcgagacgaactgatcaaatgctacggc
gagatggagtttaaacgctggcttgccgaagtcttagataataaggcaccaacgacgctc
gcagtaaaagctgaaacaacagagacccaagaagaatcagcgcccagcgtcacgattgaa
acccaatacgatacgattctgaccgaagctcagcttgatgagtggattgccaaactcaaa
caagcgccattaatggccgtggataccgagaccaccagcctcgactatatggttgctgaa
cttgttggcatgtccttcgcagtggaagcaggaaaagccgcttatctgcctttagcccac
gattatgttggcgcacctcaacaattagataagcaaactgcactcgaaaaacttcgcccc
ttactcgaagatgccaagatcaaaaaagtcggtcaaaacctgaaatatgacatcagcgta
ttagccaatgcaggcataaaactccaaggcgtggtattcgacactatgctcgaatcctat
gtgtttaactcgatcgcctcacgccatgatatggatgggttggcgcttaaatacctaggc
cataaaaatatcgcctttgaagatattgccggtaaaggtgctaaacagctaacctttaac
caaattccgttggaaacagcagctccctatgcggcggaagatgccgatattacgctacgc
ctacatcaacacctgtggccaagactcgaaaaagaagctgaattagcctcagtttttacc
gatattgaactgccgctgatccaaattctgtccgatattgaacgccaaggtgtgtttatc
gatagtatgttgcttggtcaacagagtgatgaacttgcccgtaaaatcgatgagttagaa
actaaagcttatgatattgcaggtgaaaaattcaatttaagttcaccaaaacagctccaa
gtactgttttttgaaaagctgggttatccggttatcaaaaagacgcctaagggagcgcca
tccaccgccgaagaagtgctggtcgaattggcattagattttcctctgcctaaggtgatc
cttgagcatcgtagtctgaccaagttaaaaagcacttataccgataaattacctttaatg
gtgaacgctaaaaccggccgagtacacacaagctaccatcaggccaatgccgcaacgggg
cgtttatcctcgagcgaaccaaacctacagaatattcctatccgcaccgaggaaggtcgt
cgtattcggcaagcctttattgcaccgcagggacgtaagattttagccgccgactattcg
cagattgaattgcggatcatggcgcatttatcccaagacgcaggcttgctcaaagccttc
gccgaaggcaaagacattcacagagccaccgccgccgaagtatttggcaccgactttgac
agcgtaacctcggagcagcgtcgccgcgccaaagccgttaactttggcctgatctatggt
atgtccgcctttggattggcgcgtcagctcgacatcccccgcaacgaggcacaaacctat
atagatacttacttcgcccgctatcctggcgtattaaggtatatggaagaaacacgagcc
agtgcagcagagctaggctatgtctctacgctatttggtcgccgtttgtatttacccgaa
attcgcgaccgtaatgcaatgcgccgccaagcagcagaaagagccgcgattaacgcccca
atgcaaggcaccgccgcggatatcattaaaaaagccatgatcagcattgccgattggata
aaaactgatacccaaggtgaaatcgccatgatcatgcaagtgcacgacgaattagtgttc
gaagtcgatgccgataaagctgaaaaactcaagctcaaggtgtgtgaactcatggccaaa
gcggccaatctggatgtagaactcctagccgaagccggcattggtgataactgggatcaa
gcccactag
DBGET
integrated database retrieval system
