Shewanella sp. FDAARGOS_354: CEQ32_16330
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Entry
CEQ32_16330 CDS
T04944
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00071
Fatty acid degradation
shf00280
Valine, leucine and isoleucine degradation
shf00310
Lysine degradation
shf00362
Benzoate degradation
shf00380
Tryptophan metabolism
shf00410
beta-Alanine metabolism
shf00640
Propanoate metabolism
shf00650
Butanoate metabolism
shf00907
Pinene, camphor and geraniol degradation
shf00930
Caprolactam degradation
shf01100
Metabolic pathways
shf01110
Biosynthesis of secondary metabolites
shf01120
Microbial metabolism in diverse environments
shf01200
Carbon metabolism
shf01212
Fatty acid metabolism
Module
shf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CEQ32_16330 (fadB)
00650 Butanoate metabolism
CEQ32_16330 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CEQ32_16330 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CEQ32_16330 (fadB)
00310 Lysine degradation
CEQ32_16330 (fadB)
00380 Tryptophan metabolism
CEQ32_16330 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CEQ32_16330 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CEQ32_16330 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CEQ32_16330 (fadB)
00930 Caprolactam degradation
CEQ32_16330 (fadB)
Enzymes [BR:
shf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CEQ32_16330 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CEQ32_16330 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CEQ32_16330 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CEQ32_16330 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASF16413
LinkDB
All DBs
Position
complement(3662763..3664913)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDSVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCEI
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRQRKMSPLTLPKLEAMMSFTTAKGMV
FSVAGKHYPAPMAAVNVVEQAATKGRAEALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKTGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagatagcattaaacaacaatcaaacattcaggctttagtgctgacctcaggt
aaagatacctttatcgtgggtgccgacattactgaatttttaggcttattcgcacaagat
gattcagtactactctcttgggttgaacaggccaatgccgtattcaataaacttgaagat
ttacctttcccaaccgcttcagcgattaaaggttttgccttaggcggtggttgtgaaatt
attctggcaacggatttccgtatcgccgacaccacagccaaaatcggtctacccgaaacc
aaactaggtattatcccaggctttggtggcacagtgcgtttaccacgtgtgattggtgca
gataacgctcttgagtggatcaccacgggtaaagatcaacgtccagaagatgccttaaaa
gtaggcgcggttgacgccgttgttgcgccagaggctttagaagctgccgccattcaaatg
cttaaagacgcggttgcagaaaagcttgattggcaagcccgtcgccaacgtaagatgtca
ccactgaccttaccaaaactcgaagccatgatgtctttcacaaccgctaaaggtatggtt
ttctctgtcgctggcaaacattatcctgcaccaatggcggcggtaaatgtagttgagcaa
gcggcgaccaaaggccgagccgaagcgctgcaaattgagcatcaagcatttatcaagtta
gcgaaaaccgatgtagccaaagcgttgatcggtatcttcttgaatgaccaattagtaaaa
ggtaaggctaagaaagcgggcaagctcgctaaagatgtgaaaagtgccgccgtattaggt
gctggtatcatgggtggcggtatcgcttaccaaagcgccagcaaaggcacgccaatcgtg
atgaaggatatcgctcaacctgcattagatttaggtttaggcgaagccgcaaaactgtta
tctgcgcaagttgctcgcggccgctctaccccagaaaaaatggctaaagtgctgaacaac
atcactccagccttagactatgcaccagtgaaacatgctgacgtggttgttgaagccgtt
gttgagcatccaaaagtgaaggcacaagtactggcggaagttgaacaatacgtgagtgaa
gatgcgattatcgcctctaacacgtcaaccatttcaatcaacctgctcgccaagagcatg
aaaaaacctgagcgtttctgcggtatgcacttcttcaatccagtgcacaaaatgccattg
gttgaagttattcgtggcgagcacagctcagaagaaaccatcgcatctgttgtcgcctac
gccagcaaaatgggtaaaaccccaatcgttgtaaatgattgcccaggtttcttcgttaac
cgtgtactcttcccttattttgctggctttaacggcctgctcgccgagggtggcgacttt
gccgctatcgataaagtgatggaaaaacaattcggctggccaatgggccctgcttacctg
ctagacgttgtcggcctagacacaggtcaccacgcgcaagcggtaatggccgaaggcttc
cccgatcgtatgggcaaaactggcaatgacgcgattgacgtgatgttcgagaacaaacgt
ctcggtcagaagaatggcaaaggcttctacgcttactctgtggatagccgcggtaagcca
aagaaagacgtcgacccaaccagctacgagctgctaaaggctgcctttggtgaacaaaaa
gcattcgatgcggatgaaatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcatcacctgccgaagcggatatgggcttagtctac
ggtttaggcttcccaccattccgtggtggtgtgttccgttacttagatactatgggcgta
gccaactttgtcgccttagctgacaaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgcgcccttgcagccaacaacggtagctactaccaagcctaa
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