Shewanella sp. FDAARGOS_354: CEQ32_17160
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Entry
CEQ32_17160 CDS
T04944
Name
(GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00780
Biotin metabolism
shf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
CEQ32_17160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shf03000
]
CEQ32_17160
Enzymes [BR:
shf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
CEQ32_17160
Transcription factors [BR:
shf03000
]
Prokaryotic type
Helix-turn-helix
Other families
CEQ32_17160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
Rrf2
HTH_28
HTH_20
HTH_5
MarR_2
MarR
HVO_A0114
HTH_10
Fe_dep_repress
HTH_Crp_2
HVO_A0261_N
PF0610-like_N
HTH_1
BPL_LplA_LipB_2
HTH_36
HTH_34
HTH_DeoR
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ASF16558
LinkDB
All DBs
Position
3843765..3844724
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AA seq
319 aa
AA seq
DB search
MSDNWVRKREILGLLSSEHFVSGEELATQLGISRAAVSKHVDALEDYGVAIYSVKGRGYK
LANPISLIDSARLIQSIDNRCFYFDEIPSTNGFMLSHTSELKSGDVCVAEYQSAGRGRRG
RTWVSPYGHHLYFSQFWSFPQGIAQAMGLSLVVACSLVEVLKSFGVDNIGVKWPNDIYLN
YKKLAGILIEMSGQADSECQLIIGIGVNMAMSEDQGKGIDQPWSDLSSLTDMPNKTDLVI
ALHKQLKRDIQLFEREGLAAFKTRWKQADLFHGKEIRLLMGENHVDGICRGIDEQGAVLL
ETADGIQAYIGGEISLRAR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataactgggtgagaaaacgcgaaatactgggattactgtcgagcgaacatttt
gtctcaggtgaagaattggctacgcaactgggtatttctcgtgcggcggtgagcaagcat
gtcgatgctttggaagactatggcgtggcgatctacagtgtcaaaggccgcggttacaag
ttagctaatcctatctcccttatcgactcggctcgtttaattcagtcgatcgataatcga
tgcttttactttgatgaaatcccgagcactaacggctttatgttaagccataccagtgag
ctgaagagtggcgatgtgtgtgtggctgagtaccagtcagcgggacgaggacgtagagga
cgaacttgggtgtctccctatggacatcatttgtatttctcgcagttttggtcattcccc
caagggattgcacaggccatgggcttaagcctagtggtggcttgtagtttagttgaggta
ctgaaatcctttggtgttgataatatcggcgtgaaatggccaaacgatatttatcttaat
tataaaaagcttgctgggattttaattgaaatgtccgggcaggcggatagcgagtgccaa
ttaatcattggtattggtgttaacatggctatgtcggaagaccaaggtaagggaattgac
cagccttggagcgacttgtctagcttgacggatatgccaaataaaacggacctcgtgatt
gcactacacaaacagttgaagagagacatacagttgtttgagcgtgaagggctggcagcc
tttaaaacgcgctggaaacaggcggatctattccatggtaaagaaattcgtttactgatg
ggtgagaatcacgttgacggcatctgtcgagggatcgatgaacaaggtgcagtattgtta
gaaaccgccgatggcatacaagcctatatcggcggagaaatcagtttaagagcaagataa
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