Shewanella sp. FDAARGOS_354: CEQ32_18335
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Entry
CEQ32_18335 CDS
T04944
Name
(GenBank) TetR family transcriptional regulator
KO
K18136
TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CEQ32_18335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shf03000
]
CEQ32_18335
Transcription factors [BR:
shf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CEQ32_18335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_HI_0893_C
TetR_N
TetR_C_10
TetR_C_24
HTH_Tnp_1_2
HTH_3
HTH_Tnp_4
Cmr2_hel_dom2
Motif
Other DBs
NCBI-ProteinID:
ASF16768
LinkDB
All DBs
Position
complement(4073514..4074086)
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AA seq
190 aa
AA seq
DB search
MDNKRDLILRSAEKIIATAGLHNLSMQKLAVDAGVAAGTIYRYFKDKEDLIIELRKDVLQ
QIASKLLENINEGSFDEKFRRLWFKIVELGREQSHANLSFAQYSHLPGVDAPEHQAFERE
IFQPLHQLFEQAKNQGMIQKLDNTLLFSIAFEPAIAIGKRLRRGHLECTENEIRRACELC
LKAISINLQL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaacgtgacttaatacttcgctccgccgaaaaaatcattgcgacagcaggc
ttacataacctttcaatgcaaaaactagcagtagatgcaggcgttgccgcaggtacgatc
taccgctacttcaaagataaagaagatttgatcattgaactgcgtaaagacgtattacaa
caaattgccagcaagttgcttgaaaacattaatgaaggcagctttgacgaaaaatttcgc
cgcctatggttcaagattgttgaactgggtcgtgaacaatcccatgcaaatttgagtttt
gctcagtattcccacctcccaggggtagatgcacctgagcaccaagcatttgaaagagaa
atatttcaaccgctacaccaattatttgagcaggcaaaaaaccaaggaatgattcaaaag
cttgataataccttgttgttttctatcgcctttgagccggctatcgccataggcaaacgc
ctacggcgaggccatttggaatgtacagaaaatgaaatccggcgggcatgtgaattatgc
ctaaaggccatttcaatcaatcttcaactttaa
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