KEGG   Shewanella sp. FDAARGOS_354: CEQ32_18385
Entry
CEQ32_18385       CDS       T04944                                 
Name
(GenBank) channel protein TolC
  KO
K12543  outer membrane protein, adhesin transport system
Organism
shf  Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:shf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:shf02000]
    CEQ32_18385
   02044 Secretion system [BR:shf02044]
    CEQ32_18385
Transporters [BR:shf02000]
 Other transporters
  Pores ion channels [TC:1]
   CEQ32_18385
Secretion system [BR:shf02044]
 Type I secretion system
  Adhesin protein transporter
   CEQ32_18385
SSDB
Motif
Pfam: OEP Tsi6
Other DBs
NCBI-ProteinID: AVL27180
LinkDB
Position
complement(4083249..4084616)
AA seq 455 aa
MLSAILLPLSAQSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVDLTGG
YGYEQTDSVSTRRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSFEASA
DQWALLAAAEDMALDVSKVYLNYLRTDEVLKLAEKNLNSHKEIYDQIKQRTDSGLGSTAD
LSQISGRLARANANVISARNNLLDAKAQFIRVVSADPVDLIQPVPDADMLPKDLNSSLAD
ADKNHPILKSAANDIRAAENERSSAQANYYPQVSLELNGSWNNDVGGEDGVSELASQNVG
GYSNDIVAMVRVRYNLFAGGKDLAREKESAYKLGEAKEIRQRAQREVIEGVNLAWNAYEM
LAPQKQYIRDHVIAAKDTQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYDEIIA
KYRVLNATGRLLDSLKVTRPEAWRGERNYEGGANQ
NT seq 1368 nt   +upstreamnt  +downstreamnt
ctgctgtcagctatcttgcttccactatcggctcaaagccaaacgcttgagcaagcggtt
gcgcacacgctcgataccaacccagatctacgagtggcgtttaaccgattcaaagcgaga
gaagagcaagtaaatcaggcaattgctggttatatgccaacagtcgatctcactggtggc
tatggctacgagcagacggatagcgtatcaacgcgtcgacgcaaaaatgtcggtgatgtt
gatagcaatggcgtcgcggaactcaaccgtggtgagtttggtattagcctaaaacaaatg
ctttttgatggtttttataccagcagtgaagttgaccgttatagctttgaagccagtgca
gaccagtgggccttacttgctgcggctgaagatatggcattggatgtcagcaaagtctat
ctcaactaccttcgtactgatgaagtgttgaagctggctgaaaaaaatcttaacagccat
aaagaaatttatgatcaaatcaagcaacgtactgattcaggtctaggctcaacagccgat
ctatcacaaatatcaggacgtcttgcaagggcaaatgcgaatgtgatttctgcccgaaat
aatttgctcgatgctaaagcgcaatttatccgagtcgtgtctgccgacccagttgactta
attcaacccgttccagatgccgatatgttaccaaaggatttaaacagtagcttagcagac
gcagataaaaatcatcctatccttaaatctgcagcaaacgatattcgtgctgctgaaaat
gagcgttcatccgcccaagccaactattatccgcaagtttcgttagagctaaacggtagc
tggaacaatgatgtgggtggcgaagatggcgtaagtgaattagcgagccaaaatgtaggt
ggttatagcaatgacatcgtcgctatggtgcgagtcagatacaacctattcgctggcggt
aaagatcttgctcgcgaaaaggaatctgcttacaaactgggtgaagcgaaagaaatccgt
caacgtgcacaaagggaagtcattgaaggggtaaaccttgcatggaacgcctacgaaatg
ttagcgcctcaaaagcaatacattcgcgaccatgtcatcgcagccaaagacactcagtcc
gcctatgcgcaacaattcaatctcggccaacgcagcttgctcgacttactggatactgag
aatgagttattcgaagctcgcaaggactacttacaggctgaatatgatgaaatcattgcg
aaataccgtgtactaaatgcgacaggccgcttactcgactcactgaaagtgactcgtcca
gaagcatggcgtggcgaacgtaactacgaaggaggagctaaccaatga

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