Shewanella sp. FDAARGOS_354: CEQ32_18450
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Entry
CEQ32_18450 CDS
T04944
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00300
Lysine biosynthesis
shf00470
D-Amino acid metabolism
shf01100
Metabolic pathways
shf01110
Biosynthesis of secondary metabolites
shf01120
Microbial metabolism in diverse environments
shf01230
Biosynthesis of amino acids
Module
shf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CEQ32_18450 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CEQ32_18450 (lysA)
Enzymes [BR:
shf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CEQ32_18450 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ASF16784
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Position
4097346..4098590
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AA seq
414 aa
AA seq
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MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHIVCYAVK
ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY
CFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV
VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQRIVIEHFDVGGGL
GVTYDDETPPHPDVYAAALLKRLGHRKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVNPRDEDTQVFDIVGPVCETGDFLGKDRQLAIAAGD
LLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcactttctctaccaagataataccctgtacgcagaaggctgtcgggtcaatgat
ttagcccagcagtatggcacgccactgtatatctattcccgtgcgacgctcgaacgtcac
tggcatgcctttaataatgcagttgccgaccatccacatatagtgtgttacgcggtgaaa
gccaactcgaacttagccgtactgaacgtattggctcgtttaggtagtggttttgatatt
gtctcgggcggcgagttagcgcgggtgattgaagccggtggtgaccctgccaaagtggtg
ttttcgggcgtgggtaaaaccgttgccgaaatggagcaggcattaaatcttggtatctac
tgctttaacgttgaatcgagtgctgagcttgaacaacttaacgatgttgccggccgctta
ggtaaagttgctccagtgtcactgcgggtgaatcccgatgtcgatgccggtacgcatcct
tatatttcgacgggtcttaaagaaaataaattcggtatcgccatggatgaggccgaagtt
gtatttgctcgcgcccatgcgctgccgcatttgcaggtaaaaggggttgattgccatatc
ggctcacagctcactgaaattcagccgtttctcgatgcaatggacagaatgctatcgctc
attgaccgcctagccgagcaaaggatagtgattgagcactttgatgtcggtggcggttta
ggggtgacctatgatgatgaaacgccaccgcatcctgatgtgtacgccgctgcactgcta
aagcgtttaggtcatcgcaagctcaaactgattttcgaaccgggccgtgcgattgctgcc
aatgcggggatttttgtgactgaggtgctgtacctcaaagaaaacagtgacaaacgtttt
gcgattgttgatggtgccatgaacgacttaattcggcctgcactctatagtgcatggcaa
aatatcattccggtgaatccacgggatgaagatacgcaagtatttgatattgtaggacct
gtgtgcgaaaccggtgactttttaggtaaggacagacaactcgcgattgcggcgggggat
ttactggttgtgcgctccagtggtgcttacggttttgccatggcgtcgaactataatact
cgtccgcgtgcggccgaggtcatggtggatggcgataaggcttatctggtgcgagagcga
gaaaaattagcgcagctctggcaaggtgagcagctcctgccgtaa
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