Shewanella sp. FDAARGOS_354: CEQ32_19520
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Entry
CEQ32_19520 CDS
T04944
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf03030
DNA replication
shf03430
Mismatch repair
shf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ32_19520
03430 Mismatch repair
CEQ32_19520
03440 Homologous recombination
CEQ32_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shf03032
]
CEQ32_19520
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_19520
03029 Mitochondrial biogenesis [BR:
shf03029
]
CEQ32_19520
DNA replication proteins [BR:
shf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CEQ32_19520
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CEQ32_19520
TLS (translesion DNA synthesis) factors
Other SOS response factors
CEQ32_19520
Mitochondrial biogenesis [BR:
shf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CEQ32_19520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASF16973
LinkDB
All DBs
Position
4338071..4338775
Genome browser
AA seq
234 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGGRNQGQG
APMGGMPQNAGYQSAPQQQAVPAQNQYAPAPQAAPAYQAPAPQPQSSYNQQPAQQSYGQQ
QAQPHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtgcgttatatgccaaacggtaacgcagtcgcaaacatcaccgttgcgaccagcgaatcg
tggaaagaccaacaaggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttt
ggcaaattggctgaaattacgggtgagtacctgcgtaaaggttcacaggtttacctcgaa
ggtaaattgcaaacgcgtaagtggaaagaccaaagcggtcaagatcgttacagcactgaa
gtggttatcgaccaaagcggtagcatgcaaatgttaggcggccgtaaccaaggtcaaggc
gcccctatgggcggtatgccacaaaatgcaggctaccaatcagcaccacaacaacaagct
gtacctgcacaaaaccaatacgcgccagctccgcaagcggctccggcttaccaagcacca
gcgccacaacctcaatctagttacaatcagcagccagctcagcaaagttatggtcagcaa
caggcgcagcctcacgctcagccacagcagggcggttatgcgcctaagccggcagctcct
gcgtatcaagcgccagcggctcctgcacagcgccctgcgccacagccacaacaaaacttt
actccagatttggatgatggttgggacgacgatatcccgttttaa
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integrated database retrieval system
