Shewanella sp. FDAARGOS_354: CEQ32_19955
Help
Entry
CEQ32_19955 CDS
T04944
Name
(GenBank) [FeFe] hydrogenase H-cluster radical SAM maturase HydE
KO
K01012
biotin synthase [EC:
2.8.1.6
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00780
Biotin metabolism
shf01100
Metabolic pathways
shf01240
Biosynthesis of cofactors
Module
shf_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
CEQ32_19955
Enzymes [BR:
shf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.6 biotin synthase
CEQ32_19955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-ProteinID:
ASF17054
LinkDB
All DBs
Position
complement(4438332..4439414)
Genome browser
AA seq
360 aa
AA seq
DB search
MITRPSPPAPVTQPTSVKPTLLKPTAFSYAEILSLLQGQDDEWLFSRAQLATKLQFNQQV
YLRGIVEFSNHCRNHCHYCGLRTENRQVTRYRLSNEEILNAVDSIAELGLGTVVLQSGDD
FSYSCKRISSLISEIKQRHNLAITLSLGDRKHHELESWREAGADRYLLKMETFDRALFAR
CRPKANFDERIARLNYLKSLGYQTGSGIIVDLPGMTDAILACDIQHLSELQLDMLACGPF
IAHNQTPFATSPNGSALKSHRVSAILRLMNPGANIPATSSLDALEKGARELALKRGCNVL
MPSFTPAQVSGDYSIYPGKNQQKNPAAERLNQVCQQIQRHGLIPSFSRGDSKRTQYVSRH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcgccctagcccgccagcgccagtcactcagccaacgtccgttaaaccgacc
ttgcttaagcccacagcgttttcctatgccgaaatcctttcgctacttcaggggcaagac
gatgaatggctatttagtcgcgcccagctcgccactaaattgcaatttaatcaacaggtg
tatttacgcggcattgtcgagttttcgaatcactgtcgtaaccactgccattactgtggt
ttacgcaccgaaaatcggcaggtaacacgctatcgactctcaaacgaagaaatccttaac
gcagtggatagcattgccgagctgggactaggtactgtagtgctgcaatcgggggatgat
tttagctacagttgcaagcgcatcagtagccttatcagtgaaattaagcagcgccataac
ctagcaatcaccctctccctcggtgatcgcaaacatcatgagttggaaagctggcgagag
gcgggtgccgatcgctatttactcaaaatggaaaccttcgaccgcgccctctttgctcgg
tgtcgccctaaagccaattttgacgagcgcattgcaaggctcaattatcttaagtctctg
ggatatcaaactggctcagggattattgtcgatttaccgggaatgactgatgcgatttta
gcgtgtgatattcagcatttatcggagttgcagcttgatatgctggcctgcggccccttt
attgcccataaccaaacaccgtttgcgacttcccccaatggcagcgcccttaagagtcat
agggttagcgctattttgcgactgatgaatccgggggcgaatattcctgccaccagttcc
ctcgacgccctcgaaaaaggcgcaagggaactggcactcaaacgcggatgtaatgtgctt
atgccctccttcaccccagcacaagtcagtggcgattacagcatctatcctggaaaaaac
cagcaaaaaaacccagcagcagagcgacttaaccaagtctgccagcaaattcaacgccac
gggctaatcccctcctttagccgtggtgattcaaaaaggacccaatatgtgtcaaggcat
taa
DBGET
integrated database retrieval system
