Shewanella sp. FDAARGOS_354: CEQ32_20100
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Entry
CEQ32_20100 CDS
T04944
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_20100
Transfer RNA biogenesis [BR:
shf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CEQ32_20100
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Gene cluster
GFIT
Motif
Pfam:
ThiF
Pyr_redox_2
Sacchrp_dh_NADP
DAO
NAD_binding_7
Spermine_synth
3HCDH_N
UDPG_MGDP_dh_N
AlaDh_PNT_C
AdoHcyase_NAD
ApbA
Shikimate_DH
TrkA_N
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
ASF17083
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All DBs
Position
4470651..4471454
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AA seq
267 aa
AA seq
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MTEAYQNRFGGIGRLYGQKALAKFAASHVVVIGIGGVGTWAAEALARSGIGQITLIDLDD
ICVTNTNRQIHALTSTIGDSKVAVMAKRIREINPDCQVNEVEDFITVDNLGDYLLGSQSG
GNIDYVVDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQVDPTQIQLTDLAKTYQDPLLA
KVRNILRREYNFSKNVQRRFAVDAVFSSEQLVYPQADGSVCSTKATADGSMRMDCASGFG
AVTMVTGTFGFVAASRVLSRLAQLANE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcctatcaaaatcgctttggtggcataggccgcttgtacgggcaaaaagcg
cttgcgaaatttgcagcatctcatgtcgtggtaattggtattggtggtgtgggcacttgg
gcggctgaggcattggcaaggagtggtattggtcaaattaccttaattgatttagatgat
atctgcgtgaccaatactaaccgtcaaattcatgcgcttacctcaactattggcgattct
aaggttgcagttatggccaaacggatccgcgagattaatcctgattgccaagtcaatgaa
gtagaagattttattacggtcgacaatctgggtgactatttactaggttctcagtcaggc
ggcaatattgattatgttgttgattgtattgatgcggttaaacaaaaagcagcgcttatt
gcttggtgcaaacgtcaaaaaatcaagatagtgaccgtaggtggtgctggtgggcaagtt
gatccaacacagatccaactgactgatttggctaagacctatcaagatccgttgcttgca
aaagtgcgtaatattctccgccgtgaatataacttctccaaaaatgtacaacgtcgtttt
gctgtggatgccgttttttctagtgaacagctcgtttaccctcaagctgatggctcggtt
tgtagtactaaagccaccgccgatggtagcatgcggatggattgtgcttcggggtttggt
gctgtgactatggtcactggtacttttggatttgtggcggcgagccgtgtcctttctcgg
ttggcacaattagctaacgaataa
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