Shewanella sp. FDAARGOS_354: CEQ32_20845
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Entry
CEQ32_20845 CDS
T04944
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf02010
ABC transporters
shf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CEQ32_20845
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CEQ32_20845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_20845
Transporters [BR:
shf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CEQ32_20845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
APP1_cat
B12-binding
PcrB
DUF5615
Motif
Other DBs
NCBI-ProteinID:
ASF17221
LinkDB
All DBs
Position
4640836..4641846
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AA seq
336 aa
AA seq
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MTRLLMLFITFSLLPVSSGYGKDLKFAVVPKFYSVFFDQSKTGCIDAAAEIKGVECVYRG
PESSSVRLQDEVINQLIDEGIDGIAVAVTQSKYLFENSLKRAKEAGIPIVTYDSDFDASI
NQDPKNFRSAYIGTDNFELGKSLGEQLKKLRPNGGTLIMQSGRPDSPNLNLRLMGVRSAL
SGKKYDIPPGKLLNNEQGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA
QNDAALYREMIAPYQGKISNKEVVVIITDTSPEQLMMLKDNLAHINVGQNPYEMGRQAIL
TLYKIVTKQKYQEIIYTPVTFCSPQNFNTCEKRTGM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagattacttatgttgtttattaccttcagtttattacccgtatcctctggctat
ggaaaagatctgaaatttgctgttgtgccgaaattttatagtgttttttttgatcaaagt
aaaacgggctgtatagatgccgcggctgaaataaaaggtgtggaatgtgtatatcgaggg
ccagaatcaagcagtgttagattgcaagacgaggtcataaaccaactgattgatgaaggt
atcgatgggattgctgtcgcggttacgcaatctaagtatctttttgaaaatagcttaaaa
agagctaaagaagccggtattccaattgtcacctatgattcagattttgatgcttccatc
aaccaagaccccaagaattttcgctcagcctatatcggtacagacaatttcgaattgggt
aaatcattaggtgaacaattaaaaaaattacggcctaatggtgggacgcttatcatgcaa
tctgggcgccctgattctcccaatttgaatttaagactgatgggggttcgctctgcgttg
tcgggaaaaaaatacgatattcctccagggaaattacttaataacgagcagggctggaca
gaagtgagagaacctttgtttaattttgaccaacttagtcaagcggttaagcagatggag
tctgttatgaaaggcaagccagtgaaagcagactcatttattgctgttggtggttgggct
caaaatgatgcagcgctttaccgtgagatgattgccccataccaaggaaaaattagcaac
aaggaggtcgtcgttattattactgacacctctccagagcaattaatgatgttgaaggat
aatcttgcgcatatcaatgtcggtcaaaatccctatgaaatgggcaggcaggcaattttg
acgctttataaaattgtcaccaaacaaaagtatcaagaaataatttatacaccggtgaca
ttttgctctccacagaacttcaatacctgtgaaaagcgtacaggaatgtaa
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