Shewanella sp. FDAARGOS_354: CEQ32_21035
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Entry
CEQ32_21035 CDS
T04944
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEQ32_21035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_21035
Enzymes [BR:
shf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CEQ32_21035
DNA repair and recombination proteins [BR:
shf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CEQ32_21035
Prokaryotic type
CEQ32_21035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASF17256
LinkDB
All DBs
Position
4687136..4687801
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AA seq
221 aa
AA seq
DB search
MILATWQAFIDHQRTQPYYQQLIAFVNQQREAGKVIYPPKEDVFNAFKTTPLEQVRVVLI
GQDPYHGPNQAHGLCFSVKRGVKPPPSLANMYKELVNDIPGFHIPNHGDLTAWAEQGILM
LNTVLTVEQGQAHSHANAGWEIFTTEALKLLNAQQRPIIFVLWGSHAIKKGAVINAPQHQ
ILSGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEVPIQWQV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ctgattttggcgacttggcaagcatttatcgaccatcaacgtacgcagccttactatcaa
cagctgatcgcatttgtgaatcaacagcgagaagcgggcaaagtgatttatcctccgaaa
gaggatgtgtttaatgcattcaaaacaacgccgctcgagcaagtgcgtgtagtgttaatt
ggtcaagatccctaccatggccccaatcaagcccacggtttatgtttctcagtgaaacga
ggggttaaaccgccgccttcgcttgccaatatgtataaagaattggttaacgatattccg
ggattccatattcccaaccatggtgatttaacggcctgggctgaacaggggattttgatg
cttaatactgtcctcacggtagaacaggggcaggcgcactcccatgccaatgcgggctgg
gaaatttttacgacggaagcgttaaagctgcttaatgcgcagcaacgtccaattatcttc
gtgctgtgggggagccatgccatcaaaaaaggtgctgtgattaacgcgccacaacaccaa
attctatcgggaccgcatccatcacctttatcggcgtatcgtggtttttttggttgtggg
catttttcaaaagtgaatcaactactgatggctcggggcgaagtgccgattcaatggcag
gtttaa
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