Shewanella sp. FDAARGOS_354: CEQ32_21280
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Entry
CEQ32_21280 CDS
T04944
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shf03009
]
CEQ32_21280
Enzymes [BR:
shf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CEQ32_21280
Ribosome biogenesis [BR:
shf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CEQ32_21280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASF17301
LinkDB
All DBs
Position
4733992..4734714
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AA seq
240 aa
AA seq
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MQSKRGRLDRYLAVKLQIHRKAVRELLLAERVYVDGTPAKALDLLVDEFSHIVFDGQVLQ
ANQPVYLMLHKPVGVVSATKDKEHRTVIDLLDCEARHELHIAGRLDLNSSGLLLLTNDSR
WSEALMSPEQKVDKVYRVTLAYPLSEDYVAAFAQGMYFGFEDITTQPAKLTILDTHIAEV
TLREGKYHQIKRMFGRFRNPVVGLHRLSIGEITLDKHLSPGDSRMLTAQEVASIYHSKMK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaaaacgcggtcgtctcgatagatacctagctgttaagttacaaattcaccgt
aaagccgtgcgagaactcttgctggcggagcgagtatatgtggatggcacgcctgcgaaa
gcgctcgatctgctggtggatgaattttcccacattgtgtttgatgggcaagtcttacag
gccaaccagcccgtgtacttgatgttgcacaagcccgttggggtagtgagtgcgaccaaa
gacaaggagcaccgcactgtgattgatttactcgattgcgaagctcgccatgagctgcat
attgctgggcggttagatttaaactcatcgggtttattgttactgaccaatgatagtcgt
tggtccgaggcgttaatgtcacccgagcaaaaagtggataaagtgtatcgagtgacttta
gcctatcccttgagtgaggactatgtcgcggcattcgcgcagggcatgtattttggcttt
gaagatatcaccacacagcctgcaaagttgactatcctcgacactcatattgcagaggtt
actttaagggaagggaagtaccatcaaatcaagcggatgtttggtcgtttccgtaatcca
gtggtgggattacaccgcctttccattggtgagattaccctagataaacacttaagccct
ggtgatagccggatgttgactgcacaagaagtcgcctctatctatcattcaaaaatgaag
taa
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