Shewanella sp. FDAARGOS_354: CEQ32_21465
Help
Entry
CEQ32_21465 CDS
T04944
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_21465
Transporters [BR:
shf02000
]
Other transporters
Pores ion channels [TC:
1
]
CEQ32_21465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
OprF
DUF748
Opacity
TSP_3
Phenol_MetA_deg
YqbF
DUF3575
Motif
Other DBs
NCBI-ProteinID:
ASF17702
LinkDB
All DBs
Position
complement(4779004..4780101)
Genome browser
AA seq
365 aa
AA seq
DB search
MMKNTLKVVLLTSMLPLAASASQELTPWYVGAGLGVNNYEHIATDNGDDNPYAWDIFAGY
MFNDYFGAEIGYRDLGSADWTNGGISNDADVKGATLGLVGVWPLGNRWSLSAEAGAMYYT
LENSQHTGTTSSSYSSNDFAPYFGAGVGYNFTDNLKLQAKYRRYENLDDTDFNTIEADSN
YWGLELSYRFGTPAAVAPVAAAVVAAAPVDSDNDGVYDDKDQCPATPATHKVDSVGCTIY
ENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNM
VLSDKRADAVAKILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIVTTTEK
QPVLK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaatacattaaaagtagttttacttacatcaatgcttccacttgctgccagt
gcatctcaagagttaactccttggtatgttggtgcaggtttaggcgttaataactatgaa
cacattgcaactgataacggcgatgataacccatacgcatgggacatcttcgcaggctat
atgtttaatgactactttggtgcagaaatcggctatcgtgatctaggtagtgcagattgg
actaatggtggcattagcaatgatgcagatgttaaaggtgcaactctgggcttagtcggt
gtatggccactaggtaaccgttggagcctgtctgcagaagcgggtgcaatgtactacacc
ttagaaaacagccaacatactggcacaacttcaagctcatacagctctaacgattttgcg
ccttactttggcgcaggtgttggttataacttcaccgataatctgaagttacaagctaaa
taccgccgttatgaaaacttagacgacacagacttcaacacaatcgaagctgacagcaac
tattggggcttagaattaagctaccgttttggtactccagcagcagtggctcctgtagct
gccgccgttgttgcagcagcaccagttgactcagacaacgatggtgtatacgacgataaa
gatcagtgcccagcaacgcctgcaactcacaaagttgactctgttggctgtactatctat
gaaaacgttaaaaagcaagaagatgtaggttctatccagtttgctaacgattctgcagta
gtgaagaaagagtactacaaagacatcgaaagactggctaactacctgaacaagaaccca
gaattcactgttgaaatcgcgggtcacgcttctaacgtaggtaaaccagaatacaacatg
gttctgtctgacaagcgtgctgacgctgttgctaagatccttgttgaaaaatatggcatc
agccaaagccgcgtaacttctaacggttacggtatcactaagccattagtggctggtgac
tcgaaagaagctcatgcagctaaccgccgcatcgaagccatcgtgacaactactgaaaaa
caacctgttctgaagtaa
DBGET
integrated database retrieval system
