Shewanella sp. FDAARGOS_354: CEQ32_21760
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Entry
CEQ32_21760 CDS
T04944
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00260
Glycine, serine and threonine metabolism
shf00460
Cyanoamino acid metabolism
shf00630
Glyoxylate and dicarboxylate metabolism
shf00670
One carbon pool by folate
shf00680
Methane metabolism
shf01100
Metabolic pathways
shf01110
Biosynthesis of secondary metabolites
shf01120
Microbial metabolism in diverse environments
shf01200
Carbon metabolism
shf01230
Biosynthesis of amino acids
shf01240
Biosynthesis of cofactors
shf04981
Folate transport and metabolism
Module
shf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CEQ32_21760 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CEQ32_21760 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CEQ32_21760 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CEQ32_21760 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CEQ32_21760 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CEQ32_21760 (glyA)
Enzymes [BR:
shf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CEQ32_21760 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ASF17384
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Position
4855676..4856929
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTSWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcgattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaactaaccaataagtacgccgaaggctatcca
ggcaagcgttactacggcggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggcgcgacttacgcaaacgtacaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcacggtggtcacttgacccacggttcacctgttaacttctccggtagactgtac
aacatcattccttacggcatcgatgaatcaggcaaaattgactacgacgaaatggaacgt
ctggcggttgaacataagcctaagatgatgatcggtggtttctctgcttattcaggtatc
gttgactgggcaagaatgcgcgaaatcgcagacaaaatcggtgcttatctgtttgtcgac
atggcacacgttgcgggtcttatcgccgctggtgtgtatccaaacccagtgccacacgcg
cacgttgtgacctcaaccactcacaagaccttagccggtcctcgtggcggtatcattctg
tctgctgccgatgatgaagagttatacaaaaagctgaactctgcggtattcccaggcggt
caaggcggtcctttgatgcatgttatcgcgggtaaagcggtagccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaacgctaaagctatggttgaa
gtgttcttagagcgcggttacaaaatcgtttctggcggtactgacaaccacttaatgctg
gtggacttaatcggtcgcgacctgacgggtaaagaagccgatgccgctttaggtagcgcg
aacatcacagtaaacaaaaactctgtgccaaatgacccacgttctccattcgtgacctct
ggtgtacgtattggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gagttaaccagttggatctgtgacatcctcgacgatgctcacaatccagcggtcatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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