Shewanella sp. FDAARGOS_354: CEQ32_22130
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Entry
CEQ32_22130 CDS
T04944
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shf03000
]
CEQ32_22130
Transcription factors [BR:
shf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CEQ32_22130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
tRNA_synt_1c_R1
HrpB2
Motif
Other DBs
NCBI-ProteinID:
ASF17443
LinkDB
All DBs
Position
complement(4934412..4934993)
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AA seq
193 aa
AA seq
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MRNAEFDRAQVLRGAMAAFMRKGYTKTSMQDLTQATGLHPGSIYCAFSNKRGLLIAAIEQ
YQQDRNEQFKLIFSNNQPVLKNLKTYLDNVVVECISCDSQQACLLTKALNEIAEQDDEIQ
HIISQNLHLWQNALTAQFELATSQGILQGELNSEQRAQYLMMGIYGLRTFAHTHPQAEIL
QQLANKLFDDVCR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgcagagtttgatagggcgcaagtactcaggggggcaatggcggcctttatg
cgtaagggatataccaagaccagcatgcaagatctcacccaagccaccggattacaccct
gggtccatttactgtgcttttagtaataaacgtggattactcattgccgctatcgagcaa
tatcaacaggatagaaacgagcaattcaagcttatcttctccaataaccagccagtgctt
aaaaatttaaaaacttacttagataatgtcgtcgtcgaatgtatcagctgcgatagccag
caagcctgtttactgaccaaggcgttaaatgaaatcgccgagcaagacgatgagattcaa
catattatcagtcagaatctccacctatggcaaaacgcactcaccgcacaatttgaactg
gcaacatctcaggggatattgcagggagaactcaatagcgagcaaagagcgcaataccta
atgatgggcatttatggcttacgaaccttcgctcacacccatccgcaggcagagatattg
caacaattagccaataaactgtttgatgacgtttgcagataa
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