Shewanella sp. FDAARGOS_354: CEQ32_22525
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Entry
CEQ32_22525 CDS
T04944
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_22525
Transporters [BR:
shf02000
]
Other transporters
Pores ion channels [TC:
1
]
CEQ32_22525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_WDR36-Utp21_1st
DUF6906
Motif
Other DBs
NCBI-ProteinID:
ASF17512
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Position
5006461..5007648
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AA seq
395 aa
AA seq
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MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYS
RLTPAVRYGKIFAADRYGEVVAFDEATGEQVWKKDFSEEFRDNALAKNKGARLAAGVTAA
RNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSFEAYNVDT
GAKLWVYNMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELATAGLSLFL
VDDHSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVG
RIQVDSSGLFSQPLVVDDKIYVQGRSGKLAVVTLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaagaacctgctagccgctgggttaagcctagccatgttatccgcc
tgttcttctagtgatgtggaagaagaaccggtaagtgagttaactgcgattcaggcgaca
gtatttcctgaagtaagttggagcgcctctgtaggtgatggtgttggtgattattactct
cgccttacccctgcagttcgttacggtaaaatttttgcggccgaccgttatggtgaagtc
gttgcttttgatgaagcaacgggtgaacaggtttggaaaaaagattttagtgaagagttc
cgtgataacgccttagccaaaaacaaaggcgcacgtttggccgctggtgtaacagcggca
cgcaataagctctttatcggcggtgagagtggccttttggctgcgctgaatgcagaagac
ggccaagtattatggcatgtgattgcgggtggcgaattgttatctaagccaaccgtggct
gacgacgttgtggtggtgagcaccagttcaggttcatttgaagcctataacgttgatact
ggcgcaaaactgtgggtttataacatgcagttgcctaacctgacgctccggggaacgggt
tcagcagcttatgaagcgggtggtttctttattggtaccgccgatggcaaagtggctgtt
gtcgtcaaaaacaacggtcaagctgcgtgggagcaagccatctataatcctacaggtggc
aatgagtttacccgtatggccgatgtggatatgacaccgttgatcctcggcgataactta
tatgcggtgagctacaacggtaacttggtgtcgatggaactgcgcaccggacggattatt
tggactcgtaagtactcaagcttcaatgagttagctacggcgggtttaagtttgttcttg
gttgatgaccatagtcgtatctattcagtggatagacgtaacggtttagagttgtggagc
aactctgagctggtcaatcgcacactcacttcaccagaggtatataaagactatttggtc
gtgggtgattttgaaggttatctgcactttatcgaccgcagcacaggcagtattgtcggt
cgtatccaagtggacagctctggattattcagccagccattagtggtggatgataaaatc
tacgtgcaaggtcgcagcggaaagttagctgttgtaacacttccttag
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