Sphingobacterium sp. 21: Sph21_0025
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Entry
Sph21_0025 CDS
T01450
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00061
Fatty acid biosynthesis
shg00071
Fatty acid degradation
shg01100
Metabolic pathways
shg01212
Fatty acid metabolism
shg02024
Quorum sensing
shg04146
Peroxisome
Module
shg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sph21_0025
00071 Fatty acid degradation
Sph21_0025
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sph21_0025
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sph21_0025
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shg01004
]
Sph21_0025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shg04147
]
Sph21_0025
Enzymes [BR:
shg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sph21_0025
Lipid biosynthesis proteins [BR:
shg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sph21_0025
Exosome [BR:
shg04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sph21_0025
Exosomal proteins of breast cancer cells
Sph21_0025
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADZ76618
UniProt:
F4CDX4
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All DBs
Position
complement(23763..25556)
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AA seq
597 aa
AA seq
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MALSRVFDLLSNYKSSFGQKTVVAGKEGGKWMRYETDHFLQIVDNLSKGLLNLGIKKGDK
LAIMSANRPEWNFTDFAINQIGAAVVPLYPTLSDHDLNYITENAEVKMAFVGTSDLAKKL
KTALTLHNLDIPLYTFDKVEGEKYWKEIEEIGASLTTVDLDVYRNDIHEDDLLTLIYTSG
TTGSPKGVFLSHKNLVSNFTDCAHLLPENYKTAISFLPLCHIFERMVVYLYFYKGISVYY
AENMDTIVADINDVKPNGFTTVPRVLEKVYDKIVDKGKALTGIKHALFFWALDLGLKFKE
PRKNSFFYKIKLAIARKLIFKKWQMALGGNIVGIISGGAALQERLARVFWAAGIPVLEGY
GLTETSPVIAVNNFERNGLGFGTVGPLLKSVKVKIASDGEILCKGPNVTKGYYKNDEATR
EAFDEDGYFKTGDIGELTTEGFLRITDRKKEMFKTAGGKYVAPQIIENKFMESTLIAQIM
VIGEGKRFPAALIVPAFEELKKWAGKNGISGSTKEDLIKDPKVIEKYQHVLDKTNESFGH
WEQVKKFVLLPNEWTIDGGELTPKLSLKRKVILERTKELIDHIYSDEHDQKPREQHP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcgcgcgtttttgatttgttatctaattataagtcttcctttggacaaaaa
acggttgtggcggggaaggagggaggaaaatggatgcgttatgaaaccgatcattttctt
cagattgttgataaccttagtaaaggcttgctcaatttaggcattaaaaaaggagataag
cttgccattatgtcagctaaccgaccggaatggaactttaccgactttgcgatcaaccaa
ataggtgctgcggtagttccgttgtacccaaccttatcggatcacgacctaaattatatt
accgaaaacgcagaagtgaaaatggcctttgtaggcacctcggatttagctaaaaaattg
aagactgcacttaccttacacaatctggatattccattatatacttttgacaaagtagag
ggggagaaatattggaaggaaattgaagagattggggcatcgctcaccaccgttgatctc
gacgtttaccgaaatgatattcatgaagatgatttattgacgctcatttatacctcggga
actaccggtagtcctaaaggcgtgtttttatcacacaaaaatttggtaagtaatttcacc
gattgtgcccatttgcttccggagaattataagacagccattagctttttgcctctatgc
catatctttgagaggatggtcgtttacctatacttttataaagggataagtgtttattat
gcggaaaatatggataccattgttgccgacatcaatgacgtgaagccgaatggctttaca
acagtgccccgggtattagaaaaggtttacgacaagattgtggataaaggaaaggcactt
accgggattaaacatgcgctgttcttctgggctttagacttgggcttgaaatttaaagaa
ccccgtaagaattcgtttttctacaagattaagttggcaatagctagaaagctaatcttc
aaaaagtggcagatggctcttggaggtaatattgtgggcattatcagtggaggtgctgct
ttacaagagcgtttggcacgagtattttgggccgcaggtatcccggtgttggaaggttac
ggtttaacggaaacttcaccggttatagcagtaaataattttgagagaaatggattgggg
tttggaactgtaggtcctttgttaaaatcagtgaaggtaaaaatagctagtgatggagag
attctgtgtaaagggccaaatgtgacgaagggctattataaaaatgatgaggctacacga
gaggccttcgatgaagatgggtactttaaaaccggcgacattggtgagttgacaacagag
ggctttttgcgaataacagatcgtaaaaaggaaatgtttaaaacggcaggtggtaagtat
gtcgctcctcagataatagagaataaatttatggaatcgacattgattgcacaaattatg
gtgattggagaaggaaaacgttttcctgccgcgctcatcgttcctgcgtttgaggagtta
aaaaagtgggcaggcaaaaatggaatttccggaagtacgaaggaagatctgataaaagat
cccaaggttatagaaaaatatcaacatgttcttgataaaactaatgaaagttttgggcat
tgggaacaggttaagaaatttgttctgctaccaaatgaatggacgattgatggtggtgag
ctgacaccgaaattaagcctgaaacgaaaagtgatattagagcgaaccaaagaactgatt
gatcatatttatagcgatgaacatgatcagaaaccaagggaacaacatccatag
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