Sphingobacterium sp. 21: Sph21_0322
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Entry
Sph21_0322 CDS
T01450
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sph21_0322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_0322
Enzymes [BR:
shg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sph21_0322
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sph21_0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
nSTAND3
Zn_ribbon_6
PriA-like_WH
AAA_30
Ribosomal_L3
NUDIX-like
Motif
Other DBs
NCBI-ProteinID:
ADZ76904
UniProt:
F4C352
LinkDB
All DBs
Position
complement(351500..353989)
Genome browser
AA seq
829 aa
AA seq
DB search
MLELQAEGHQQERTTKFVDVILPLAISKTYTYRVPYELTSSVAVGKRVIVQFGKSKIYAA
IVYAISSKAPERYEAKYILDVLDDSPVITADQLKLWDWVSDYYMCHIGEVMQAAMPAVFK
LASETKVMASDRLALVDRTSLNDKEFLILDALDLAGELKVSDIMKLLGQKTVFPILKSLF
NKDAIVISEELRERYKPKKKAFVVLSSFFDQGEERHLLLDSLERAPKQQDAVLAYLQLRK
RQEHIAKSELLEASGCGQSALKALIDKGVFIIEERVVSRLYGEDVFVESGFDLSAAQQEA
IESIQRQFLEKDVVLLHGITASGKTQLYIRLIEAALTQGNTILYLLPEIALTSQIVERLR
IYFGQEVGVYHSRFNDNERAEVWQKVLKGEIRVILGARSAVFLPFQNLGLIIIDEEHEIS
FKQFDPAPRYHARDTAVYLGHLHHAKVLLGSATPSIETYYNAKSNKYGLVTLSQRYGESK
LPTIRIVSLKEEGRDKRLQSYFSEVLLNEIKQAINNKEQVILFQNRRGYTPMLLCRTCGY
TPKCTNCDVSLTFHKSTGKLHCHYCGFKEEQIQVCPACGSTHLENKGFGTERIEEELSML
IPEAKIGRLDLDSTRGKDSFERIITDFDEQQFNVLVGTQMVAKGLDFGKVTVIGIINADA
LINYPDFRAFERSFSLLSQVSGRAGRRSSAGNVIIQAYATQHRVLEQVVNHDYEGMFMTE
VQERKHYAYPPFYRLIKIDVKHKDQNEAYNAAQRLGTLLKEAFGNRVLGPETPLISRIRN
YFINTLLIKVERDGTSIQKVKTALRQLLITFESNKANKGVFVQLDVDPY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacttcaggcggaaggacatcaacaggaaagaactacaaagtttgttgatgtt
atactgccattagctatttcgaaaacttacacttatcgtgtaccttatgaactgacgtcg
tcggtggctgttgggaaaagggttatcgtacaatttggaaaaagtaagatatacgctgca
attgtctatgctatatcatcaaaagcacccgaacgctatgaggcgaaatatatattggat
gttttagatgattcaccggtcattactgcagatcagttgaagctttgggattgggtgagc
gactattacatgtgtcatataggcgaggttatgcaggctgccatgcccgccgttttcaaa
ctggcctccgagacgaaagtaatggcctccgatcgattggctttggtagacagaacttcc
ctgaatgataaagaatttctaatattggatgctcttgatttggccggcgagctgaaggtg
agcgacatcatgaagttgttaggacaaaaaacggtgttccctatattaaaaagcctgttt
aataaagatgccattgtcatatctgaagagctgcgggaacgttacaagccaaagaaaaag
gcgttcgtcgttctcagctccttttttgatcagggcgaggagcggcatctgcttttggat
agtttagagcgtgcccctaaacagcaagatgccgtattagcttatttacagttgcgtaaa
agacaagagcacatagcaaagagcgaattgttggaagcaagcggctgtgggcagtcggcc
ttaaaggcattgatagataaaggcgtttttatcattgaggagcgcgttgtaagccggtta
tatggtgaagatgtttttgtggagtctggttttgatttaagtgcagcgcagcaagaggcg
attgaatcaatacagcgtcaatttttagaaaaagacgtggtgttacttcacggtattacc
gcttccggtaagacccagctatatattcgccttattgaagcggcgcttacacaaggaaac
acgatcctgtatcttctacccgaaatcgctttaacttcacaaatagtagaacgtctccgg
atatacttcggacaggaagtgggggtctatcattcccgttttaatgataatgagcgggca
gaagtatggcaaaaagttttaaaaggcgagattagagtaattttaggtgctcgatcggcc
gtctttttaccttttcaaaacctgggcttgatcattatagacgaagaacacgaaatttct
tttaagcaattcgatcccgctcctcgttatcatgccagggacacggcggtctatcttgga
catttacatcatgcaaaagtgctgttagggtcggctacaccttctattgagacctattac
aatgccaagtcaaacaaatatggattagtgaccttgtcgcaacgatatggtgaatctaag
cttccgacgatccgtattgtgagcttaaaggaagaaggtcgtgataagcgactgcagtct
tatttcagtgaagtgttattaaatgagattaagcaggcaataaataataaagagcaggta
attcttttccagaacagaagggggtataccccgatgctgttgtgccgcacttgtggatat
actccgaaatgcacaaattgtgatgttagtttaacttttcataagagtacgggcaaatta
cattgccattactgtggatttaaagaagagcagatccaggtatgccctgcttgcggatcg
acgcacttagagaataaaggtttcggcacggagcggattgaagaggaactgtccatgttg
attccggaagccaaaatcggccgtctagatttggattccacaagggggaaggatagcttc
gaacggataattaccgacttcgatgagcagcagttcaatgtgcttgttggtacccaaatg
gtagcaaaaggattggactttggtaaggttaccgttattggaattatcaatgcagacgcc
ttgattaattatcccgactttagagcttttgaaagaagcttttctttgctgtcgcaagta
agtggtcgtgccggaaggagaagttccgcaggaaatgttattatacaggcttacgcaacc
cagcatcgcgtgctcgagcaggtcgtaaatcatgactatgaagggatgtttatgactgag
gttcaagagcgaaaacattatgcttacccacctttttatcgattgattaagatcgacgta
aaacacaaagatcaaaacgaggcgtataatgctgcccaacgtttgggtaccttactgaag
gaggccttcggtaatcgggttttaggtcctgaaacgccacttatttcgcgcatcagaaat
tattttattaataccctgctgattaaagtcgaacgtgatggaaccagtatacaaaaagta
aagacagctcttcgccagctactcatcacttttgaaagtaacaaggcaaataaaggagtc
tttgtgcaactggatgtggatccttattaa
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