Sphingobacterium sp. 21: Sph21_0962
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Entry
Sph21_0962 CDS
T01450
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_0962
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Sph21_0962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ADZ77536
UniProt:
F4CC86
LinkDB
All DBs
Position
complement(1170393..1170881)
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AA seq
162 aa
AA seq
DB search
MVFHPAGEDPIKVPRFEEAAGFYTTKQRSYNMSRVKGKNSKPELTLRRALWAKNLRFRLH
DKALPGKPDIVIKKYKLAIFVDGEFWHGYNWEKNKHQIKSNKAFWIPKIERNMQKDRINH
EKLREMGYTVFRFWSDEVKRNLPRVVNQIMLYVETAREIKIP
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggtatttcatcccgcaggcgaagatcccattaaggtgccacgttttgaagaggcggct
ggcttttatactacgaagcagcgtagttacaacatgtcgcgtgtgaaaggcaaaaactct
aaaccggagttgacgctgcgtcgtgcgctttgggccaaaaatctgcgttttagattacat
gataaggccttacccggcaaacccgatatcgttataaaaaaatacaaattggcaattttt
gttgacggtgaattttggcatggttataattgggaaaagaacaaacatcaaattaaaagc
aacaaggcattctggatacccaaaattgaacgtaacatgcagaaagaccgtatcaatcat
gaaaaacttagagaaatgggctatactgtttttcgtttttggtcagacgaggtgaaaaga
aatctaccacgggttgtcaatcagattatgctttatgtagaaacggccagagagattaaa
ataccttga
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