Sphingobacterium sp. 21: Sph21_1003
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Entry
Sph21_1003 CDS
T01450
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_1003
Transporters [BR:
shg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sph21_1003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
Motif
Other DBs
NCBI-ProteinID:
ADZ77575
UniProt:
F4CCN9
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All DBs
Position
complement(1227447..1228883)
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AA seq
478 aa
AA seq
DB search
MKSKNILVYSLCLSFTLLISGCKDYLDTSPSTAISDELMFNTVDGAQTAMNGVYNFIRLR
STDVEYGTVIQFNNGFDAAANDLIVRNSMGQMQVYYAHNTAETRADANLTYQVWSYFYAI
INNVNIIINKVDGAEGDAAQKAAIKGQAMAIKGWAYFYLIRFYQQTYALAKDMPGVPYYD
QGGTTEGRPRESVSTIYGHIVEDLTAAVDLLAPFNRMYKSQVNQAVAQGILAEVYLAMED
WQNAATAARAAKTGYPLMTREEYRSGFNDWEMGEWMWGVHQTPEQNLGNGSPFTLWANQT
RGDRWTFDFMYVNDLFKDLFSAEDVRNQFWFREDHGFWTSDKFRDAADFYGDIILMRASE
MYLIEAEALARQGQENDAKQVLWELQDQRQAARSTNSGAALIDDILVERRKELYGEGFAW
FDLIRNQRPVHREGDHPLKPEIPARSWQFILQIPTNEFNSNTNLTSADQNPYDGIFQP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaaaatatattggtgtatagcttgtgtctttccttcactttgttgatttcg
ggatgcaaagactatttagatactagtccgtcgactgcaatttccgacgagttaatgttt
aacacggttgatggtgcacaaacggcaatgaacggcgtttataattttatccgattaaga
agtaccgacgtagaatatggcacggtcattcaattcaataatggtttcgatgctgcagcg
aacgatttgattgtgcgtaattcaatgggacagatgcaagtgtattatgcccacaatacg
gcggaaacccgagccgatgccaatttaacttatcaagtgtggagttatttttacgcgatt
atcaataacgtaaatatcattattaataaagtggatggagcggagggtgatgccgcccaa
aaagcagccataaagggtcaggctatggctatcaagggctgggcttacttttacttaatc
cgtttttaccagcaaacgtacgcgttggcgaaagatatgcctggtgtgccctattatgat
caagggggcacaacagaaggacgaccaagagaaagcgtttcgactatatacggccatatt
gttgaggacttaacagcagcggttgacctgcttgcgcctttcaatagaatgtataagagc
caggttaaccaagcggtggctcaagggattttagcagaggtttaccttgcgatggaagac
tggcaaaatgcagcaaccgcagcgcgggcggccaaaactggctatcctttaatgacgcga
gaggaataccgctcgggatttaatgattgggaaatgggcgaatggatgtggggtgtgcat
caaacgccagaacagaacttgggcaatggctcaccttttaccctgtgggctaatcagacg
cgtggcgaccgctggacttttgatttcatgtatgttaatgacctttttaaagatttattc
tcggcagaggacgtgcgtaatcagttttggttcagggaagaccatggcttttggacttct
gataagtttagggatgcagctgacttttatggagacattattttaatgcgtgcttcggaa
atgtatttgattgaggcggaagctctcgctaggcaaggacaggagaatgatgctaaacag
gtcttatgggaacttcaagatcagcggcaggctgcccggtcaaccaatagcggcgcggcg
ttgattgacgatatcttagtggaaagaagaaaagaattgtatggagaaggtttcgcttgg
ttcgatttaatccgaaatcaacggcctgtacatcgggagggagatcatccgttaaagcct
gaaatacctgcacgctcgtggcaattcattttgcaaatccctacgaatgaatttaacagc
aataccaacttaacttcagccgatcaaaatccctacgatggcatttttcagccttag
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