Sphingobacterium sp. 21: Sph21_1127
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Entry
Sph21_1127 CDS
T01450
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shg03019
]
Sph21_1127
03009 Ribosome biogenesis [BR:
shg03009
]
Sph21_1127
Messenger RNA biogenesis [BR:
shg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sph21_1127
Ribosome biogenesis [BR:
shg03009
]
Prokaryotic type
rRNA processing factors
Sph21_1127
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PoNi_N
DnaJ_CXXCXGXG
S1
Motif
Other DBs
NCBI-ProteinID:
ADZ77696
UniProt:
F4CDG1
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Position
complement(1401955..1403508)
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AA seq
517 aa
AA seq
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MVKELIVDSSPETGTTIALLQDKQLVELNKEQVNNNYAVGDIYLGRIKKIMPGLNAAFVD
VGYSKDAFLHYLDLGPQVQSLIKLTKLVKNGSYKDKLLNSLKLEKDINKAGKISEILSRN
MLLPVQIAKEPISTKGPRLSSDLSIAGRFVVLVPFSDAVSISKKIKSNTERNRLKKIVEG
IKPQNFGVIIRTVSEGKGVAELEKDLRDLITKWESFTKRLASTDPAKKILGEMDRTSTIL
RDILTDEFSHIYINDPIIYEETKSYIQEISPDLEKIVKLYKHKDPIFEHFGIEKQIKAAF
GKIVNLQGGAYLVIEHTEALHVIDVNSGNRTANKENQEDNALLVNKEAAKEIARQLRLRD
MGGIVVVDFIDMHKPTNRKELHDYLKECMGNDRAKHTILPPSKFGLVQITRQRVRPEMTV
VTNEKCPACGGTGEIRASIVLMDDIESNLSYVLNEQNEKNITLCVHPYIEAFIKKGFMSR
RLKWFFRYGKWIKVKAISSYFMNEFHFLNAKEEEIKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaggaattaatagtagattcttccccggaaacggggacaactattgctttacta
caggataaacagcttgttgagttaaataaagaacaggtaaataataattatgctgttggc
gacatctatttgggcagaataaagaaaataatgcccgggttgaatgctgcttttgtagat
gtaggctactcgaaggatgcttttttgcattatttggatctagggccacaggtacagtca
ctcattaagcttaccaagctagtaaagaatggcagctataaagataagctgctcaatagt
ttaaaactagaaaaggatatcaataaagcaggcaaaatttctgagatcctaagtcgtaac
atgttgttgccggtacagattgcaaaagagccaatctcaaccaaagggccgcgtttaagt
tccgatttatccatcgcaggaagatttgtcgttttggtacctttttctgacgcggtttcg
atttcgaaaaaaattaaaagtaacaccgagcgaaaccgacttaaaaagattgttgaggga
atcaaacctcagaattttggcgttattatccgtaccgtttcggaaggaaaaggagttgct
gaattggagaaagacctccgagatttaatcaccaagtgggaatccttcacgaaacgtctt
gcttctactgatcctgcgaaaaaaatattgggtgaaatggatcggacatccaccattttg
cgcgatatattaacagacgagttttctcatatctatatcaatgatccgattatttacgag
gagacgaagtcttacattcaggagatttctcctgatttggaaaagatagtaaagctgtac
aaacacaaggatccgatctttgaacacttcggtatagagaaacagattaaagccgcattt
ggtaaaattgttaatctgcagggaggggcttatttggttatcgaacatacggaagcactg
cacgttattgacgtgaatagtggaaaccgaacggccaacaaagaaaatcaggaggacaat
gccctcttggtgaataaggaggccgccaaagaaatagcccgtcagcttcgtctacgtgat
atgggaggaatcgtggttgtcgattttatcgatatgcacaaaccaaccaacaggaaggag
ttgcacgactatttaaaggaatgtatgggcaacgatcgcgctaaacatactattctcccg
ccaagtaaatttggattggtgcagattacaaggcaacgtgttcgtcctgaaatgacagtg
gttactaatgagaaatgtccggcctgtggaggtaccggcgaaattcgagccagtatcgta
ttaatggatgatattgagagtaatttaagttatgttttaaacgaacaaaacgagaagaat
attacgctctgcgttcacccatatattgaagccttcattaagaaaggctttatgtccaga
cgcttgaaatggtttttccggtacggtaaatggatcaaagtaaaggctatttcgtcttac
ttcatgaatgaattccacttcttaaacgccaaagaagaagaaataaaactataa
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