Sphingobacterium sp. 21: Sph21_1337
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Entry
Sph21_1337 CDS
T01450
Name
(GenBank) Tetratricopeptide TPR_2 repeat-containing protein
Organism
shg
Sphingobacterium sp. 21
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_17
TPR_16
TPR_11
TPR_19
TPR_14
TPR_12
CFAP70_TPR_C
ANAPC3
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_9
RMD1-3
PRP6_TPR
CFAP70_mid_TPR
TPR_Psidin_N
FAT
TPR-S
ARM_TT21_C
HIR3_bundle
ARM_TT21_2nd
TPR_YpiA_C
T7SS_EccA1_N
ARM_TT21_5th
ARM_TT21_4th
BTAD
TPR_MalT
ChAPs
ETO1_C
TPR_20
RNase_R_N
NatA_aux_su
TPR_Slam
TPR_15
SHNi-TPR
DUF7041
HAT_Syf1_CNRKL1_N
DUF6340
NTase_sub_bind
HAT_PRP39_N
Coatomer_E
Suf
Rapsyn_N
HAT_PRP39_C
HEAT_Nup120
TPR_21
TPR_EMC2
YosV
Motif
Other DBs
NCBI-ProteinID:
ADZ77900
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Position
1664300..1665703
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AA seq
467 aa
AA seq
DB search
MEDDFDFEFSEDPKFSVERYEEMIRNEDQYFFDAQAFEGIIDYYMEKNDPVKALQVVDYA
VNQHPFAAIFYIKQAQLYSVTNQLDLALKALDKAELLEASEPDIYLIRGGILGTIDRYEE
AIANLEKALSLTENPDEIFLQMAMLFQNKGDYEQAIKYLKKSLEHNMENQEALYELAFCY
DVLDRQEESIGFYLQYIDNEPYSYAAWYNLGNAYHKLSLYEKAIDAYDYAILIKENFASA
YFNKGNALVNLDRYAEAIDVYKETFEYEPPSAETYCAIGECYEKLEQMDEARSYYKKAVK
IDPKLGDGWFGIGVTLDYEERYFESLHFYKKALDIDDQNPEYWFAIADARYKLKQIAEAE
AAYEKVVELNPLDTEAWLDYSSILYEQEKLTTAIEVISEAIKNNPDAPELYYRMVAYMFA
AGKYTEALNFLELALTADPEKYHILFEYLPQLQDNKVILEIINKFTK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgattttgattttgaattctctgaagacccaaagttttcggtagaacgttac
gaagagatgatccgtaatgaggatcaatacttttttgacgcccaagcatttgagggaatc
atcgattattatatggagaagaatgatcccgtaaaagctcttcaagtagttgattacgcg
gttaaccagcacccctttgccgccattttttatatcaagcaagcgcaactatactctgtg
accaatcaattggatctagcattaaaggcgctagacaaagctgagttattggaagcttct
gaacccgatatatatcttattcgtggcgggattcttggaacaatagatcgatacgaagag
gctattgcaaacctggagaaagcgctgtctctaacagagaatccggacgagatattcttg
caaatggctatgctttttcaaaataaaggcgactatgagcaagcgatcaaatacctaaaa
aagagccttgagcataatatggagaaccaggaagcattatatgaactggctttctgctat
gatgttttagatcggcaagaggaaagtatcgggttttatcttcaatacattgataatgaa
ccatattcctatgctgcctggtataaccttggaaacgcatatcataaattaagtttgtat
gaaaaggcgatcgatgcctatgattatgcgatattgattaaggaaaattttgcctcggct
tatttcaacaaaggaaatgcattggtaaatttagatcgatatgccgaggcgatcgatgtt
tataaggagacctttgagtacgagccgcctagtgcggagacctactgcgctattggagaa
tgttatgagaagttggaacaaatggatgaagcaaggtcgtattataaaaaggcagtgaaa
attgatccgaagcttggagatggttggtttggaattggtgtgacgcttgattacgaagaa
cgctactttgaatccttacatttttacaaaaaagcgttggatattgatgatcaaaatccg
gaatattggtttgcaatagctgatgcccgctataagttaaagcaaatcgcggaggccgag
gctgcttatgaaaaggtggtggaattgaatccgcttgatacggaagcttggcttgactat
tcatcgattttatatgagcaagaaaaacttacaaccgctattgaagtaatatcagaagct
ataaagaacaaccccgatgctcctgagttatattatagaatggtggcttatatgtttgct
gcaggaaaatatacagaagcgctgaattttctggaattggccctgacggcggatcccgaa
aaatatcacatactatttgaatatctcccccaactacaagataataaggtgattctagaa
attatcaacaagtttaccaagtaa
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