Sphingobacterium sp. 21: Sph21_1869
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Entry
Sph21_1869 CDS
T01450
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
shg
Sphingobacterium sp. 21
Pathway
shg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sph21_1869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shg03021
]
Sph21_1869
Transcription machinery [BR:
shg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sph21_1869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_20
HTH_23
HTH_40
HTH_10
UPF0122
HTH_24
HTH_38
HTH_11
HTH_30
HTH_5
HTH_16
RPA_C
HTH_DeoR
Xre-like-HTH
TnsD
HTH_7
Terminase_5
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ADZ78429
UniProt:
F4C9A2
LinkDB
All DBs
Position
2261723..2262307
Genome browser
AA seq
194 aa
AA seq
DB search
MPKVPSVTGETIVQLRNGDERAFEAIYESYHRLIYHFAYSFLKNVELSKEVTQETFLSLW
VNREKLDESLPLYPYLFTKARRLTIDAFRRLAKHQRLQAEWTAALGESNNDTEQRMFYRE
LEVMTEAALQQMPKQQQLVFRMSRSEGLSYEEIAEELQISKNTVKYHLVQSLKFLKGFFA
KHGILYFFVLTLFI
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagtgcccagtgtgacaggagaaaccattgtacagcttcggaatggagatgag
cgagcttttgaagcgatttatgaatcttatcatcgcttgatttatcattttgcttacagc
tttctgaaaaatgtggaactcagcaaagaagtgacgcaggaaacctttttaagtttgtgg
gttaaccgggagaaattagatgagtctttacctttatacccctatttgtttacgaaggct
agaaggttgaccattgacgccttccggcgcttggcaaaacatcaacgcttacaagctgaa
tggactgcggcattgggcgaatccaataatgacacggagcagcggatgttttatcgagaa
ctcgaagttatgaccgaagcggctttacaacaaatgcctaaacagcaacaactggttttc
agaatgagtcgatctgaaggactctcttatgaggaaattgccgaagagttacagatttct
aaaaataccgtgaagtatcacttggtgcagtctttaaagtttctgaaaggtttctttgct
aagcatggaatactttatttttttgttttgactttgtttatttga
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