Sphingobacterium sp. 21: Sph21_1900
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Entry
Sph21_1900 CDS
T01450
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_1900
Transporters [BR:
shg02000
]
Other transporters
Pores ion channels [TC:
1
]
Sph21_1900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
Plug
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
ADZ78460
UniProt:
F4CA34
LinkDB
All DBs
Position
complement(2306644..2309646)
Genome browser
AA seq
1000 aa
AA seq
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MTKHSKWIAICSIPILSCAVARESLYAAARPVIRSAYETSLQQRTIRGKITNVNGTMPLI
GASIKIKGMQGGTSTNQDGLFELALPQVPVTLVISSLGYITKEVAVTDQQNLNIQLQEDA
NNLEEVVVVGYGSLDKRELTSAVSNLKQRDLVAGTVSPLLAIQGKVPGLNIASNNGSDPN
ASVSIQLRGVNSVKASQGPLVVIDGVPGGDINSVAKEDIESINVLRDASAAAIYGTRASG
GVILVTTKRPQPGKATVNFTSEYFIESVRKRPDVLSAEEYLAHGLGEDNGARTDWYDVIT
NKNPFSHRQVVNVSGGSENANVYTTFFKRDAKGISIGSQRGEIGGRVNTNFKFFDGRAEL
STNASYNQVDADFPGNSAPGNFRDENNSLYNIAIGLDPTISPYDPSDPSGYNVLTGGYNT
WNPLAEVMLRKKQNQYRYLLANATLKVNLTEDLYTTAMVGIKSNSEHPSFFRSAQHRVSR
EQNVDGYAKQEYKRWQDRIVEWTVNYSKRFENHQITAVAGYSYQDFNGQGFWAENSNFPV
DGLEEHDMGSGTWLADGRAGLGSWKDPWVKLAAFFGRVNYSFKDRYIITANLRHEGSSKF
APGNRWGTFPGVSAGWRLSEEPFMGKLSFIDDIKIRAGYGETGNEGFGAEVSTRMYSADT
WWPFAGNWNRTFGVKHNQNPNIRWEIKKEYNVGMDFTILNNKLSGRFDYYKRVIDNLIYE
ISVSQPPAIHDKTTMNVGSMENQGFEFELNYNVVNKNDWTYTTSLVASHNKSNLRTLWGS
QTFMDDKNFPAPGSPGTAVRLYPGEAIGQFYIWQFAGFTDDGQWLLYNKNNEVIPASDKK
LDDKRFIGNGIPKLQLSWNHAISYKNWDASIYLRSWLGYDVFNMTKMYYGIANVTGRNVL
KSAYDELANVKGEKQLSDYWLENGNFLKVDAISLGYTFNKKWIGPFKNIRVYATGRDLFV
FTKYSGLDPEININGLTPGFEELDVYPRTRTFMFGLQASF
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacacagcaaatggattgcgatatgcagcattcccattctcagctgcgcagtg
gctagggaaagcctttatgcagctgcccgaccggttattcggtcagcttatgaaacatcg
cttcagcagcggacgatccgtggaaagatcacgaatgtaaacggaacaatgccactgatc
ggcgccagtattaaaattaaaggcatgcagggaggtacctcaaccaatcaagatgggctc
tttgagctcgccttaccccaggtaccggtaaccctcgttatttcatcgcttggttacatt
accaaagaagttgctgttaccgatcagcaaaatctaaacattcaattacaagaagatgca
aacaacttggaagaagtggtggtggttggttatggctcattggataaacgtgagcttacc
agcgcagtatccaacttaaagcagcgtgatttggttgccggtacggtatcgccactactg
gccattcagggaaaggttccaggtctaaacatcgcttccaataatggctctgatccgaac
gccagcgtctccattcagctccgtggtgtcaattcggtcaaggcctcacaaggaccttta
gtcgttattgacggcgttcccggaggcgatatcaattccgttgccaaagaagatattgaa
tccattaacgtacttcgagatgcatcggctgctgcaatctacggtacacgggcctccggt
ggtgtgattttggttactaccaagcgaccacaacccggtaaggcaaccgttaactttaca
tcggagtattttattgaaagtgttcgtaaacgacccgatgtcctttcagcagaagaatac
cttgcccatggccttggagaagacaatggcgctcgtaccgactggtatgacgtcatcaca
aataaaaatcccttcagtcaccgccaagtggtaaatgtaagtggtggttccgaaaacgcc
aatgtgtacaccacctttttcaaacgcgacgccaaaggtatatcaattggttcgcaacgc
ggggaaattggtggaagggtcaataccaatttcaaattcttcgatggacgtgcggaattg
agcaccaatgccagttacaatcaagtagatgccgatttccccgggaacagtgcgccaggc
aacttccgtgatgaaaacaacagcctctataatatcgccattggcttagaccccactatc
tcaccatacgacccatcggatccctccggctataatgtcttaaccggaggctataataca
tggaaccccttggcagaagtgatgttacgtaaaaaacaaaatcaatatcgctacctactg
gccaatgccaccttaaaagtaaacctgacggaagacctttatacaaccgctatggtgggt
atcaaaagcaacagcgaacatcccagtttcttccgttcggcgcagcaccgtgtctcgcgt
gaacaaaatgtggacggttatgccaaacaagaatacaaacgttggcaagaccgtatagtc
gagtggacagtaaactatagcaagcgtttcgaaaaccatcagatcaccgcggtagccggt
tacagttatcaggacttcaacggacaggggttctgggcggaaaactccaactttccggtt
gatgggctggaagaacacgatatgggttcaggtacctggctggctgatggccgtgcgggt
ttgggctcttggaaggacccatgggttaaactggccgctttcttcggacgcgttaattat
tcgttcaaagatcgttatatcatcacagccaatctccgtcacgagggctcttctaaattc
gctcctggaaatcgctggggcaccttccccggtgtatcggcaggttggcggctcagcgag
gaacctttcatgggtaagctttcttttattgacgacatcaagatccgcgctggttacggt
gaaaccggcaacgaaggtttcggtgccgaggtatcaacccggatgtattcggccgacacc
tggtggccgttcgccggaaactggaaccgtacttttggtgttaaacacaaccaaaacccg
aatatccgttgggaaatcaaaaaagaatataatgtcggaatggatttcaccattctgaat
aataaattaagtggtcggttcgactactataagcgggttatagacaatctgatttatgaa
atcagtgtatcacaaccgcccgccatccatgataaaacaaccatgaacgtgggcagcatg
gaaaaccaaggtttcgagtttgaattaaattacaatgtagtaaacaagaacgattggact
tacactacttcccttgtggcctctcataataaaagtaacttgcgcacactctggggcagc
cagacctttatggacgataaaaacttccccgcacctggatctccgggtactgcagtacgc
ctttatcccggtgaagcgattggccaattctatatctggcaatttgcaggcttcaccgac
gatggtcaatggctgttatataacaaaaacaacgaagtcattccggcaagtgataaaaaa
ctcgatgataaacgcttcatcggcaatggtatcccgaaattacagttatcatggaatcac
gccatatcctacaaaaattgggacgccagcatctatctccgcagttggttaggctatgat
gtgtttaacatgaccaaaatgtactacggcatagccaatgtaaccggtagaaatgtattg
aaaagcgcctatgatgaacttgccaatgtaaaaggtgaaaaacaattgagtgattattgg
ctcgaaaacggaaacttcctaaaggtagatgccattagcttgggttatacgtttaataaa
aaatggatcggcccctttaaaaatatccgtgtgtatgcaaccggacgagatctcttcgtt
ttcaccaaatacagcggtcttgatcccgaaatcaatatcaacggcttaacacccggattt
gaggagctcgatgtgtacccacgcacgcgcacctttatgttcggtttacaggcgagtttt
taa
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