Sphingobacterium sp. 21: Sph21_2104
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Entry
Sph21_2104 CDS
T01450
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shg03032
]
Sph21_2104
03036 Chromosome and associated proteins [BR:
shg03036
]
Sph21_2104
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_2104
DNA replication proteins [BR:
shg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sph21_2104
Chromosome and associated proteins [BR:
shg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sph21_2104
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sph21_2104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DnaA_N-like_STI
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ADZ78663
UniProt:
F4CBS1
LinkDB
All DBs
Position
2598071..2598412
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AA seq
113 aa
AA seq
DB search
MGIRSTGLPICKLNSITMNKADLITKIAADAGITKVQAEKALSSITNSVTTTLKKGESVS
LIGFGTFTVGQRAARSGRNPNTGAVIKIKATKVPKFRPGKSLREAVASAKTKK
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaggtctactggtttgccgatttgtaaacttaactctattacaatgaacaaa
gctgatcttatcacaaagattgccgcagatgcgggcattacaaaagttcaggcagaaaaa
gccctgagcagtatcactaattcggttactacaaccttgaaaaaaggcgaaagcgtgtcg
ttgataggcttcggaacctttacagtgggccagcgtgctgcccgtagcggacgtaacccc
aacactggagccgtcattaaaataaaagctaccaaggttcctaaatttaggcccggtaag
tcacttcgcgaagccgtagcctcagcaaaaacgaaaaaataa
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