Sphingobacterium sp. 21: Sph21_2353
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Entry
Sph21_2353 CDS
T01450
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg03030
DNA replication
shg03430
Mismatch repair
shg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sph21_2353
03430 Mismatch repair
Sph21_2353
03440 Homologous recombination
Sph21_2353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shg03032
]
Sph21_2353
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_2353
Enzymes [BR:
shg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sph21_2353
DNA replication proteins [BR:
shg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sph21_2353
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sph21_2353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_14
DNA_pol3_delta_C
RCF1-5-like_lid
AAA_5
TIP49
AAA_30
Rad17
AAA_2
AAA_19
AAA_33
AAA_24
nSTAND3
AAA_18
RNA_helicase
AAA_7
AAA_16
VapE-like_dom
AAA_17
AAA_assoc_2
RsgA_GTPase
SRP54
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADZ78907
UniProt:
F4CDF1
LinkDB
All DBs
Position
2906968..2908791
Genome browser
AA seq
607 aa
AA seq
DB search
MANSGKIRTFVPMDNFIVSARKYRPSTFETVVGQQHITGTLKNAIKNSQLAQAFLFCGPR
GVGKTTCARILAKTINCQHLSSEIEACGTCDSCKSFQNGNSFSIHELDAASNNSVDDIRS
LIEQVRIPPQTGKYKIYIIDEVHMLSTQAFNAFLKTLEEPPAYAIFILATTEKHKILPTI
LSRCQIFDFNRIKVEHIAGHLANIANKEGVAYDQDGLHLIAQKADGGLRDALSMFDQIVS
FSNKNVSYQAVIDNLNILDYDYYFKLTDAIFSENSVNALLVFDEVLSNGFDGSHFISGLA
SHFRNLLVGKDASTLKLLEVSENIRQRYLEQAQQAEVGLLLSALNIANQCEINYRTSKNQ
RLQVELALLKMCHIRSAIQFNKQAIEMNNRPESVKKKPDTLAVNVVSAPPPVTATPKEPM
KPTSPAAIHQDSSPKLQESTASGKLKIPSFKDIKLSSSIPSLSDVFKDKKETDPNADPEY
ITGSDQQHFTYDDFLKVWHAFADKAKAESKITLFTLMTANPPKLRDDFKVEVIVENAIQE
NLLSISKIDMLNELRVRLKNFSIDLIPVQAESNVVRKPYTNQEKYQAMVAKNPLVDKLRQ
EFNLGFE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttggctaattccggcaaaatccgtaccttcgtgccgatggataattttattgtttctgcg
cgtaaatatcggccttcaacctttgaaacggtagtggggcagcagcacattaccggaacg
cttaagaatgccattaagaacagtcagttagcacaggcctttctcttttgcggtccacgt
ggggtggggaaaacgacttgtgcacgcattttagcaaaaacaattaattgtcaacattta
agttcggaaatagaagcttgtggtacctgcgactcctgtaagtcatttcaaaacggcaat
tcctttagtattcacgaactggatgcagcttctaataactctgttgatgatataagaagt
ctgattgaacaggttagaattcccccgcagaccggtaagtataaaatttatattatcgat
gaggtgcacatgctttcaacgcaggccttcaacgctttcttgaaaacattggaggaacct
cccgcttatgctattttcattctggcgactactgagaagcataaaatattgcctacgatt
ttatctcgttgccagattttcgactttaaccggattaaagttgaacatattgccggtcac
ctggcaaacatagcgaataaagaaggcgttgcttatgaccaggacggattgcatctcatt
gcacaaaaagcagatgggggacttcgggatgccttatccatgtttgatcagattgttagc
ttttccaataagaacgttagctatcaagcagttattgataatctgaatatcttagattat
gactattattttaagctaaccgatgcgatcttttccgaaaattcggtgaatgcactattg
gtttttgatgaggtactgtccaatggttttgatggcagccattttatttcgggtttagca
tctcactttagaaacctattagtaggaaaggacgccagtacacttaaattattggaagta
agtgaaaatattcgtcaacgctatttagagcaggcacaacaagcggaggtgggcctattg
ctttcggctttaaatatcgccaatcaatgcgaaataaattatcgaacaagcaaaaaccag
cgactgcaagtagaactcgctctgttaaaaatgtgccacatccgatcggcaattcagttt
aataagcaagcaatcgaaatgaataaccggcctgagtcggtaaaaaaaaaacctgatact
ttagcagttaacgtggtttcagcccctcctcctgtgacggcgacgccaaaggagccgatg
aaacccacgtctccggcagctatccatcaagactcttcgccgaaattgcaggagtccaca
gcctcgggaaaactgaagattcctagttttaaggatatcaaattatcgtcctcgattccc
agcttaagtgacgtttttaaagataaaaaggaaacggatcctaacgctgatcccgaatat
ataacgggatcggaccagcagcactttacctatgacgattttttaaaggtttggcacgct
tttgcagataaagcgaaggccgaaagcaagattacgctttttaccttaatgaccgctaat
cctcctaaactcagggatgatttcaaggtagaggtaatcgtagaaaatgccattcaggaa
aatttattgtccatatctaaaattgatatgctaaatgaattacgagtcagattgaaaaat
ttttctatagacctgattcccgtacaagccgaatcgaatgtcgtacgtaaaccttatacc
aatcaagagaagtatcaggcaatggtcgctaaaaatcctttagtggataaattaagacaa
gaattcaacctggggtttgaataa
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