Sphingobacterium sp. 21: Sph21_3063
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Entry
Sph21_3063 CDS
T01450
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
shg
Sphingobacterium sp. 21
Pathway
shg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sph21_3063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_3063
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Sph21_3063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
ATPase_2
MutS_C
Motif
Other DBs
NCBI-ProteinID:
ADZ79608
UniProt:
F4C5F1
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Position
3802819..3805434
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AA seq
871 aa
AA seq
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MILAKTAKKETPLMQQYNSIKAKYPGALLLFRVGDFYETFGSDAVKAAEILGIVLTKRGN
GSASETELAGFPHHSLETYLPKLVRAGQRVAICDQLEDPKSVKTIVKRGVTELVTPGVSY
NDNIIQQKANNYLASLYLDKNAIGVSFLDISTGEFLVAQGSGDYIDKLLQGFKPSEIILP
KRSYSDFVDQFSDRFYTYTLDEWPYSGDYAKETLLKHFEVNSLKGFGIDRMHLAIVAAGV
ALHYLNEAEHRNLQHISNIARIEEDRYMWLDRFTVRNLELIGSANENAITLADVLDSTSS
PMGARLLKRWMVMPLKDKRPITERLEVVEYLLKRADLREQLTQEIKQIGDLERLISKIGL
QKANPRELVQLKRALQAIGRLKELTATADAQALNVIAEQLNPCKIICDRIEKELKSEPPV
LLIKGNVIADGVDAELDRLRKVAFGGKDYLLEIQKRESEITGIPSLKISFNNVFGYYLEV
TNAHKDKVPADWVRKQTLVNAERYITNELKEYEEQILGAEDKIQVIENRLYNELLASLLD
YIKPVQLNANLISQLDVLLNFATIAHKNHYVKPIINDGKLIDIKGGRHPVIEKNLPIGEE
YITNDVFLDSDSQQIIIITGPNMAGKSALLRQTGLIVLMAQMGCFVPAKHAEIGLVDKIF
TRVGASDNLSSGESTFMVEMNETASILNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEY
LHNHPSAKAKTLFATHYHELNELTNTFNRIKNFNVSVKEVNNKIIFLRKLVPGGSEHSFG
IHVAKMAGMPAKLVVRANEILKRLEQERTGGEHIKDSMKKIQKQAYQLQMFSIDDPILVK
IRDMLNNLDVNALTPVEALMKLDEIQRLLKN
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
ttgattttggcaaagacagcaaagaaagaaactccattaatgcagcaatacaatagtatc
aaagcaaaatatcccggtgctttgttattatttagagtcggtgacttttatgaaaccttt
ggttccgatgccgttaaagcagcggaaatattgggcatcgttttaactaagcgtggtaat
ggcagtgcttctgaaaccgaattggccggatttcctcatcactcattagaaacttatctg
ccgaaactggtgagggcgggacagcgagttgcaatctgcgatcaactggaagatcctaaa
tctgtaaaaacgattgtaaaaaggggagtgacagaattggtaactccgggtgtatcttac
aatgataatatcattcaacaaaaggctaataattatttagcttccttgtatcttgataag
aatgcaataggtgtttcctttttagacatttcaacaggtgagtttttagttgcgcaagga
agtggtgactatattgataaattgttgcaagggtttaagccaagtgaaattatcctgccg
aaacgttcttatagcgattttgtagatcagttcagcgatcgattttacacttatacatta
gatgaatggccctatagcggcgattatgcgaaagaaacgcttctgaagcacttcgaagtt
aattccctaaagggatttggaattgaccgtatgcatcttgctattgtagctgcgggggtt
gctttgcactatttgaacgaagcggaacatcggaacttacagcatatctctaacattgca
cggattgaggaagatcgttacatgtggttggatcgatttaccgtccgtaatttagaattg
atcggttcagctaatgaaaatgccattacattagccgacgtattggacagtacttcatct
ccaatgggtgcccggttgttgaaacgttggatggttatgcctttaaaagacaaacgacca
attacggagcgattagaggttgtggagtaccttttaaaacgagccgatctacgggaacaa
ctgacgcaagagattaaacagatcggtgatttggagcgattgataagtaaaatcggactg
caaaaagcaaatccgagggaactggttcagttaaaaagagctttgcaagctatcggacga
cttaaagagctgacggctactgcggacgctcaggccttaaatgtgattgcagagcaatta
aacccctgtaaaataatttgcgatcggatagaaaaggagttgaaatcggagcctcctgtg
ttattgattaaagggaatgtaattgctgatggagtggatgcagagcttgatcgcttacgt
aaggttgcattcggaggaaaagattatttacttgaaattcagaagcgcgagtcggaaatt
accggtatcccgtctttaaagatttcttttaataatgtgtttgggtactatcttgaggtg
accaatgcccataaagacaaggtacccgctgattgggtaagaaagcaaaccctggtgaat
gcagaacgttatattaccaatgagttaaaagaatatgaagaacagattcttggagcggaa
gataagatacaagtcatagaaaatcgtttatataacgaacttctcgcttcgctgcttgac
tatataaagcccgttcaactgaatgccaatttaatttctcaactggacgtactgttgaac
tttgcaacaattgctcataagaaccattatgtgaagcctatcatcaacgatggtaaactc
attgatatcaagggcgggcgtcatccggtgatcgaaaaaaatttgccgattggtgaagaa
tatattaccaatgacgtgtttttagatagtgacagtcaacaaatcattatcataacagga
cccaacatggcgggtaaatctgctctattacgacaaacaggcttaattgtactaatggca
cagatgggatgtttcgttccggcaaaacatgccgaaattggtttggtagataagattttt
actcgggttggagcctctgataatctgtcatcaggtgaatctacatttatggtcgaaatg
aatgaaacggccagcattcttaataatttatccgatagaagccttattttactagatgag
attggccgtggaacaagtacttatgatgggatatcaatcgcttgggccattgccgaatac
ttgcataaccacccttctgccaaggcaaaaactttgtttgcgacgcactatcatgagctg
aatgaactgacaaatacttttaatcggataaagaacttcaacgtttcggtaaaagaagta
aataataaaattatttttcttcgtaaactcgttcccggtggtagcgaacatagtttcgga
atccatgttgctaagatggcgggcatgcctgccaagcttgttgtgagggctaacgaaata
ctaaaaaggcttgaacaggaacgaacaggtggcgaacatattaaggatagcatgaagaag
atacagaagcaggcttaccagctgcaaatgttttcaattgacgacccgattttagtcaaa
atccgtgatatgttaaataacttggatgtcaatgcattaactcctgttgaggccttaatg
aaactcgatgaaattcagcgtctattgaaaaattaa
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