Sphingobacterium sp. 21: Sph21_3092
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Entry
Sph21_3092 CDS
T01450
Name
(GenBank) Geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00900
Terpenoid backbone biosynthesis
shg01100
Metabolic pathways
shg01110
Biosynthesis of secondary metabolites
Module
shg_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sph21_3092
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shg01006
]
Sph21_3092
Enzymes [BR:
shg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Sph21_3092
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Sph21_3092
2.5.1.29 geranylgeranyl diphosphate synthase
Sph21_3092
Prenyltransferases [BR:
shg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Sph21_3092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF4003
Motif
Other DBs
NCBI-ProteinID:
ADZ79635
UniProt:
F4C5H8
LinkDB
All DBs
Position
complement(3836154..3837128)
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AA seq
324 aa
AA seq
DB search
MHSIAALQTIIGEALTERNFPDNPNTLYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKE
GLPAALAIEMFHNFTLMHDDIMDEAPLRRGRETIHKKWDINTAILSGDATLIRAYQLLAE
CKPELLAELLKVFNKMAQEVCEGQQLDMDFEKLATVTEEEYLHMIRLKTSVLLGAALEIG
AILGGADKQDRSNLYTFGVNIGIAFQLQDDILDVYGDPSKFGKQVGGDIIENKKTYLLIN
ALQLAKGSDKQELIHWTEINEFDQQQKIDRVTAIYNDLGIEKLAHKKKMSFAEQAYQALE
AMAVAREKKLSLIEFTETLLIREH
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcattctatagcagcattacagactattattggcgaggccttaacagaaagaaatttt
ccagacaatccaaataccctatacgaaccgatcaaatattttttggcaatcggaggcaag
cgtttaagaccggttctcactttattggcagctgaattatttggggcaacaataaaagaa
ggccttccagcggccttggctatcgaaatgttccataatttcaccttaatgcatgacgac
attatggatgaagccccactgcgacgaggacgggagaccatccacaaaaagtgggatatc
aataccgctatcttatccggggatgcaaccttgattcgggcatatcaattgcttgctgag
tgcaaacctgagttgcttgctgaattgctgaaagtttttaacaaaatggctcaggaagta
tgcgaaggccagcaactggatatggattttgaaaaactagcgacggtaaccgaagaagaa
tacctccatatgattcgtctaaaaacgtccgtattattgggtgcggctttagaaattggg
gccattctgggaggagcagacaagcaggatcgatcgaacctttacacctttggcgttaat
ataggaatcgctttccagctacaggacgacatattggatgtatatggagatcctagtaaa
tttgggaaacaggttgggggtgatatcattgaaaataaaaaaacttatttacttatcaat
gcgctacaattagctaaaggatcagataaacaagagttaatccattggactgagattaac
gaatttgatcagcaacaaaaaatagatcgtgtaacggccatatacaacgatcttggcata
gaaaagttagctcataagaaaaaaatgagttttgctgagcaagcctatcaagccttagaa
gcaatggcggtcgcacgtgagaaaaaactttctttaattgaatttaccgaaaccctgttg
attagggagcactaa
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