Sphingobacterium sp. 21: Sph21_3172
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Entry
Sph21_3172 CDS
T01450
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00300
Lysine biosynthesis
shg00470
D-Amino acid metabolism
shg01100
Metabolic pathways
shg01110
Biosynthesis of secondary metabolites
shg01120
Microbial metabolism in diverse environments
shg01230
Biosynthesis of amino acids
Module
shg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sph21_3172
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sph21_3172
Enzymes [BR:
shg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sph21_3172
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADZ79715
UniProt:
F4C265
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All DBs
Position
3932435..3933613
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AA seq
392 aa
AA seq
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MFNRDIIAAFEQKETPFFYYDLQLLQATIDNALTEADKYKFHIHYALKANFNERVLQIIQ
ESGIGADCVSGNEVLKAVETGFSPDKIVFAGVGKADKEIIAALHHDIFAFNVESVQELCV
IGDLAKKEGKVAKVALRINPNVDAKTHKYITTGLDENKFGIKTWELNECLDVIRNFDSLE
LIGLHFHVGSQVVDLNVFKSLCVKVNEFNNWFDERGYRLKVLNVGGGLGVNYTDPDGEPI
VDFKRYFEIFDQFLERKGEQEVHFELGRALVAQSGSLISKVLYVKNGIKKHFLILDAGMT
ELMRPALYQAYHKIEHLSAKQLSEETRDGSVNYDVVGPICESTDCFGKEVELPESKRGDL
IAIRTTGAYGEVMASKYNLRDEIRYVYSDEIV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacagagatattatagctgcttttgagcagaaggaaaccccctttttttattac
gatttacagctactccaagcaacaatagacaatgcgcttactgaggctgataagtacaag
tttcacatacattatgcgcttaaggcgaattttaatgaacgcgttttacaaattatccaa
gaatccggtattggagccgattgtgtaagtggtaatgaagtactaaaggcggtagaaacg
ggtttttcccctgataaaattgtttttgcaggtgttggtaaagctgataaagaaatcata
gctgcacttcatcacgatatatttgcttttaatgttgaatcggtacaggagttgtgcgtc
atcggcgatttagcgaagaaggaaggcaaggtggcgaaagttgcacttagaatcaaccca
aacgtggatgcgaagacacacaagtatattacaaccggtttagacgagaacaagtttggt
attaaaacttgggaactaaatgaatgcttggatgttatcaggaactttgattcgctggaa
ttaatcggactacattttcatgtgggctcacaagtagttgatctcaatgttttcaaaagc
ctgtgtgtaaaagtaaatgagtttaacaattggtttgacgagcgtggatatcgtttaaaa
gtacttaatgtaggcggaggattgggggttaactataccgatcccgatggtgaacctatt
gttgattttaaacgttactttgaaatctttgatcaatttttggagcgcaagggagagcaa
gaggtgcattttgagctcggaagagctctggttgcgcaaagcggaagcttaattagtaag
gtcttgtatgtcaagaatggtattaaaaaacattttttgattctcgatgcaggtatgaca
gaattaatgagacccgctttatatcaagcttatcacaaaatagagcatttatctgctaag
cagctaagtgaagagacgagggacggatcggttaactatgacgttgtagggcctatttgc
gagagtaccgattgtttcgggaaggaagtcgagcttccggagtctaagcgcggggatttg
attgccattcgcacaacgggtgcatatggtgaggtaatggcttcaaaatacaacctacga
gacgaaattcgttatgtttatagtgatgaaatagtataa
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