Sphingobacterium sp. 21: Sph21_3431
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Entry
Sph21_3431 CDS
T01450
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg03030
DNA replication
shg03430
Mismatch repair
shg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sph21_3431
03430 Mismatch repair
Sph21_3431
03440 Homologous recombination
Sph21_3431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shg03032
]
Sph21_3431
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_3431
Enzymes [BR:
shg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sph21_3431
DNA replication proteins [BR:
shg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sph21_3431
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sph21_3431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADZ79969
UniProt:
F4C291
LinkDB
All DBs
Position
complement(4233024..4234415)
Genome browser
AA seq
463 aa
AA seq
DB search
MEYAIVDIETTGGHAAGHGITEIAICIHDGAGICHRYETLVNPQAHIPLHISALTGISNE
MVADAPTFAEIAATVYQLLEGRIFVAHNVNFDYSFIKHHLAFCGYSWNAPKLCTVRLSRK
VLPGFASYSLGKLCQQLNISITNRHRAGGDATATGILFSLLLEKGPDAIQAMLKKASKEQ
ALPPNLPKENFERLPQTPGVYYFKDQKGKVVYVGKAKNIKKRVSAHFSGQNPNPQRQNFM
RSIYDIDFVSCGTELIAFLLEAVEIKRLWPENNRALKRFEPKYGLYSYEDQKGYIRLAID
KHQRFQQAICSFGNVIEAYNLVNRLIQEHRLCAKLNGIQKVQGACLNHINGGCLGACIGE
ENKDNYNERMYTALDNLAKMLPSFIILDKGRTEDEQSCIWVEKGKLFGIGYIAYESDINH
PEEIKDTLTRYPSNDYMMHLIMSYANQHPKLIHRLMEGEVVEQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgctattgttgacattgaaactaccgggggacatgcggccggtcacgggatt
accgaaatcgccatttgtatccatgatggtgccggtatatgccatagatatgaaacactg
gtcaatccgcaagcgcatattccacttcatatttcggcattaacaggcatcagtaatgaa
atggttgcagatgcacccaccttcgcagaaatagccgccactgtttaccaactactggaa
ggccggatatttgttgcacacaatgtaaactttgattactcctttataaagcatcacctg
gccttttgtggctatagttggaatgccccaaaattgtgcacggtccggttaagtcgcaaa
gtattaccgggattcgcgtcttatagtcttggcaaactttgtcagcaattgaatatctcc
ataaccaatcgtcaccgcgcaggtggagacgctactgccaccgggattttgttctcccta
ttgctcgagaaaggcccggacgctatacaggctatgcttaaaaaagcgtcgaaggaacag
gccttgccacctaacttacccaaggaaaattttgaacgcttacctcaaacacccggcgtc
tattactttaaagaccaaaagggaaaagtggtatatgttggaaaagcaaaaaacatcaaa
aaacgagtatctgctcatttttcaggccaaaatcctaacccgcagcgtcagaatttcatg
cgaagcatttatgatattgactttgttagctgcggaacagaattgatagcttttttgctc
gaggcagtcgaaatcaaaagattatggcctgaaaacaaccgggcccttaaacgctttgaa
cccaagtatgggctatatagctatgaggatcaaaaaggctacatacgtctggctattgat
aagcatcaacgctttcaacaggctatttgcagttttggaaatgtgattgaagcttacaac
ctcgttaacagactgatccaggagcatcggctctgcgccaaattgaatggaatacaaaag
gtgcaaggtgcttgtttgaaccacataaatggtggctgtttgggagcctgcataggagag
gagaataaggataattataacgagcgcatgtataccgctttagataatttagcgaaaatg
ctaccctccttcataattcttgataaaggtcgcacagaagacgaacaaagttgtatttgg
gtagaaaagggcaagctctttggcatcggatacattgcttatgaaagtgatatcaaccat
cctgaagagataaaagacaccttaacccgctatccatccaacgattatatgatgcacctc
atcatgagctatgccaatcaacatcccaagctaatccatcgattaatggaaggggaagta
gttgagcaataa
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