Sphingobacterium sp. 21: Sph21_3683
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Entry
Sph21_3683 CDS
T01450
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shg03032
]
Sph21_3683
03400 DNA repair and recombination proteins [BR:
shg03400
]
Sph21_3683
Enzymes [BR:
shg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sph21_3683
DNA replication proteins [BR:
shg03032
]
Prokaryotic type
DNA Topoisomerases
Sph21_3683
DNA repair and recombination proteins [BR:
shg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sph21_3683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ADZ80220
UniProt:
F4C2F3
LinkDB
All DBs
Position
complement(4496785..4497843)
Genome browser
AA seq
352 aa
AA seq
DB search
MLKVSKQQLRYCNDSSDGYTRVKKGKGYCYLDINKKPIVDKELIKRIKSLVIPPAWKNVW
ISPYDNGHLQATGLDDKGRKQYLYHPLWNETREKHKINRILAFGKVLPSLREAITADCRQ
RNLGKDRVSAIALSIMENTLMRAGNDRYRRENNSYGLTTLRSRHVKIEGQIVTFNFTGKK
GKKHNIKLSNRSLTKRLRQVMEIPGQEVFQYYNDDQEICSLDSGDLNEYIQRHTGQNFTS
KDFRTWYATLWAFKYLLELSTEEQQVKSYKKNLNACLDFVAKKLGNTRAVCRASYVCNDL
IDAYLAGSLQSYLRKTTSDEVKSLPIHEVEPLLITFLHNLKKRQQILLRLTS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagtaagcaagcagcagttgcgctattgtaatgatagttctgatggttatact
cgggtaaaaaaggggaagggatattgctatttagacatcaataaaaagccgatcgttgat
aaagaattaataaaaagaataaaaagtttagtgattccgccagcttggaaaaacgtttgg
ataagtccttacgataatggccaccttcaggccaccggattggacgataaggggagaaag
caatacttatatcacccgctatggaacgaaacaagagaaaaacacaaaattaatcgtatc
ctcgcctttggaaaggtactaccatcattgagagaggcgattacggctgattgcagacaa
cgaaaccttggtaaagaccgcgtttctgccattgcactcagcatcatggaaaacactctt
atgcgcgccgggaacgaccgctatcgacgggagaataacagttatggattaacgacctta
cgaagtcgacatgtaaaaatagaaggacaaattgttacttttaactttacaggaaaaaag
ggcaaaaagcacaacattaaactcagtaatcgtagtttgactaagaggcttcgtcaggtt
atggaaattccaggccaagaggtttttcaatattataatgacgatcaggaaatctgctcc
ttagattccggcgatttaaatgaatatatccaaaggcacaccggacagaactttacgtca
aaggattttagaacatggtatgcaaccttatgggcttttaagtacctacttgagctaagc
actgaagagcaacaggtgaagtcttataaaaagaacctaaatgcctgtctggatttcgtt
gctaaaaaattgggaaacacaagagccgtatgtagagcttcatatgtttgtaatgactta
attgatgcctatttagcgggcagcttgcaaagctatcttcgcaaaactactagcgatgaa
gtgaaatcactgcctattcatgaagtcgaaccactcttgataacatttcttcataactta
aagaaaaggcagcaaatcctattgagattaacttcttga
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