Sphingobacterium sp. 21: Sph21_3899
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Entry
Sph21_3899 CDS
T01450
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shg03000
]
Sph21_3899
Transcription factors [BR:
shg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Sph21_3899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_AraC
HTH_3
HTH_10
Xre-like-HTH
HTH_23
HTH_24
HTH_26
HTH_18
HTH_AsnC-type
MarR
2C_adapt
HTH_Tnp_ISL3
HTH_Crp_2
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
ADZ80433
UniProt:
F4C9E3
LinkDB
All DBs
Position
complement(4724635..4725672)
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AA seq
345 aa
AA seq
DB search
MSQINIKKLAAALGLSTSTVSRAFRNNSDINPLTKERILRMADELGYSPNLYASNLRESK
SKTIAIIIPEFDNNFFSQAIKGIEQQARRNGYHTLIYVTEDDVKQEATFIRSLCNGRVEG
VVMSASGEGLKHVHLNMLKERGIPLVFFDRCYEDVEATCVTGNDYESSYEATLHLIMNGC
KRIAYLVVNKNVSIGKIRMQGYLDALKSAGLPCEDELIIECTNDKEEIYKSIKRSFEKMK
PDGAFASVERLAMTTLRYCADVKLEIPSDFKLVCFSCLEIADMLNPPLSTIKQPAFEMGK
RAAEILFEALCNKESVTEKQVILLPSTIIPRKSTAVVNNTKAIGL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaataaacatcaaaaaattagcagccgctttgggtttatctacctcgactgtt
tcccgagcctttcgaaataatagcgatatcaatccgcttactaaagagcgtattttacgc
atggccgatgaattaggttattcacctaacctttatgctagtaatctgcgcgaatcaaag
agtaaaacaatcgccatcatcattccggaatttgataataactttttctcgcaagcgatc
aaaggtattgagcaacaagcgagacgtaatggctaccatacattgatttatgttacagaa
gatgatgtaaaacaagaggccacatttatccgatcgttatgcaatggaagggtagagggg
gtggttatgtcagcctcaggagaggggttaaaacatgttcacttaaatatgttgaaagaa
agggggattccattagttttttttgaccgctgctatgaagacgtagaagctacttgtgta
acgggcaacgactatgagagcagctatgaagcaacactccatttaataatgaacggatgt
aagcggattgcttacctagtggtaaataagaatgtatctatcgggaagatcaggatgcag
ggttatttagacgcgctaaagagtgccggtttaccatgtgaggacgagttgattattgaa
tgcacaaacgataaggaagaaatatataagtctattaaacgatcttttgagaaaatgaaa
cccgatggtgctttcgcctctgttgagcggttagcaatgactactttgcgatattgcgca
gatgtaaaattggagattccttcagattttaaactggtttgcttttcttgcttggaaatt
gccgatatgctgaaccctcctttaagtactattaagcaaccagctttcgagatgggcaaa
cgcgccgcagaaattttatttgaggctttgtgcaataaggagtccgtaacggaaaagcag
gttattcttcttccttcgactattattccccgaaaatcaactgccgttgttaataatact
aaagcaatcggtctttaa
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