Sphingobacterium sp. 21: Sph21_3925
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Entry
Sph21_3925 CDS
T01450
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_3925
Transporters [BR:
shg02000
]
Other transporters
Pores ion channels [TC:
1
]
Sph21_3925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Dockerin_1
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
ADZ80459
UniProt:
F4C2K0
LinkDB
All DBs
Position
4762701..4765796
Genome browser
AA seq
1031 aa
AA seq
DB search
MLTLRKTVQQLGMWMLLLLISAPVAFAQQAIKGKVTSTEDQLPIPGVSVKIKGTTQGVST
DENGNFSINANVGQSLIFSYVGMEEKEVKIASGAAVNVVLQPSTGNLDEVVVVGYGVQQK
KLITGASVQVKGDDIQKQSTTNALQALQGQTPGVQISSSSGQPGESMRVIIRGVGTIGNA
SPLYVVDGVLTSDITYLNPNDIASIDVLKDAASAAIYGSQAANGVILVTTKTGKSDQPAQ
ISLDTYTGVQKLARKIDMLNAKEYAIIMNEAAVNSGKSPYFSNDEIASLGEGTMWMDEMF
KDNALTQNYSLSAQGGSTKSVYSTSLGYTSQEGIVGGKDLSNYERFNYRINSEHNLYNDI
IRLGQHLTFTYLNTNGIGVGNQYNNSLRGAFNTSPLVPMYDDEGNFYDNSNSSWNNGEAN
PYAAMYYSNQNDRNSQRLFGDVYLVVEPFKGLRFRTSLGVDYNVNESRSFTPIYKLSTYE
FNNFSTINQNMGKNKSLLWDNLLSYTFDVADDHHFEAMIGSSAFQYTGSSMWGTNINAVF
NDLEHAWLSNATNRNDAARISLGGAPDDKDKRMSYFTRLNYNYKGTYLLNATFRADGSSR
FAQGNRWGYFPSISLGWVATNESFMESTKSWLDFLKFRASWGQVGNQNIPAFRYMAVVNY
INANYIFGNQEGVLTPATYPYRLSNANLKWETSEQLNLGFDARLLNNKLDVAFDWYRKTT
KDWLIQAPVLATAGADAPYINGGNVKNSGVELALNYHDRIGEFNYSIGLNGTYNKNTVGE
IPTADQIVHGEPNLLFDNSLEFYRAQNGFPVGYFWGLRTDGIFQTEADVQNYRNSSDGLV
QPSAQPGDVRYIDLNGDGKIDANDKTMIGNPNPDYTFGISLSANYKGFDFTLQATGVAGN
QLVQSYRNHPNPYANYTTAILDRWHGPGSSNTIPRVTEDARNWTNFSDLYIHDGDFLRIS
TITLGYDFGKIIKKNYLRKVRVYASVLNAFTFTKYEGMDPEIGYTEGFASGVDLGYYPRP
RTFMIGTNITF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgctaacactaagaaaaactgttcaacagcttggtatgtggatgctactgttgctcatt
tcagcaccagtagcttttgctcagcaagcaatcaagggaaaagtaacctctacagaggat
caacttcctattccgggagtaagtgtaaaaataaagggcaccacacaaggcgtttcaacg
gatgaaaacggcaatttctccattaatgccaacgttggtcaatcccttatattctcctat
gtaggtatggaagagaaggaagtaaaaatagcatcaggcgctgccgttaatgtagttctt
cagcctagcactggaaacttggatgaagtagtggtagtcggctatggtgtgcaacaaaag
aaactgataaccggcgcatcggttcaagtaaagggtgatgatatccaaaagcaaagtaca
accaatgcgctgcaagcgttacaggggcaaacacccggtgtacagatcagctccagctcc
ggccaacccggggaaagcatgcgtgtcattattcgtggcgttggaaccatcggcaacgct
agtccactttatgtggtagacggtgtgttaacaagtgatatcacttatctgaatccgaat
gatattgcatccattgatgtccttaaagacgctgcatccgccgcgatttatggatcacaa
gccgccaatggggtgatacttgttactaccaaaaccggaaagtcggatcagcctgcccag
atttctttagacacctataccggtgtacaaaaactggccagaaagattgatatgcttaat
gccaaagaatatgctatcatcatgaatgaggcagcggttaactcaggaaaatcaccctat
ttctccaacgatgaaattgccagtctaggagaaggcaccatgtggatggacgaaatgttc
aaagataacgcgctaacgcaaaattattcgctgagtgcacaaggtggaagtacaaaatct
gtttattctacttcattgggatatacctcccaggaaggaatcgtgggcggtaaagactta
tccaattatgaacgcttcaattatcgcattaactccgaacacaacttatacaatgatatc
atacgtttaggacaacacttgacattcacttatctgaacacgaatggaattggagtaggc
aatcaatacaacaactcgttaagaggtgcttttaatacaagtccgctagtccccatgtat
gacgatgaaggaaatttctatgataatagcaactcttcctggaacaacggcgaagcgaac
ccttacgccgctatgtattatagtaatcaaaacgatcggaacagccaacgtttatttggg
gatgtatacttagtagtagaaccatttaaagggctccgctttcgtacgagcttgggtgtc
gattacaacgtaaatgaaagcaggtcatttacacctatttacaagttatctacctatgaa
tttaataatttttcaaccattaaccagaacatggggaaaaacaagagtctgttgtgggat
aacctgctaagttatacttttgatgtggcagatgatcatcattttgaagccatgatcgga
tcttctgcttttcagtatacgggttcgagtatgtggggcaccaatatcaatgcggttttt
aacgacctggaacatgcttggttatccaatgctactaacagaaatgatgcggcccgcatc
tctttaggaggagcgcctgatgataaagacaagcgcatgtcctatttcacccgtttgaac
tacaattacaaaggtacctatctgttaaatgcaacctttcgggccgatggttcttcccgt
tttgctcaagggaatcgttggggatacttcccgtccatatctcttggttgggtagccact
aacgaatcatttatggaaagcaccaaatcctggctcgattttctgaagttcagagcaagc
tggggacaagtaggaaaccagaacattcctgccttccgctatatggcagtggtaaattac
atcaatgccaattatatatttggtaatcaagaaggtgtattgactcctgctacttatcct
taccgtctaagtaacgcaaatttgaaatgggaaacttcagagcaattaaacctgggtttt
gatgcacgtttattgaacaacaaactagacgtcgcatttgattggtatagaaaaacaacc
aaggactggttgattcaagctcccgtattagctaccgcaggagccgacgctccttatatc
aatggaggaaatgtgaagaacagcggggtcgaattagccctcaactatcatgatcgtatt
ggagaattcaactacagcattggcttaaatggcacgtataataaaaatacggttggcgaa
attccaaccgccgatcaaattgtccatggtgaaccgaatttgctatttgacaactcgctt
gaattctatcgcgcgcaaaacggatttccggtaggttatttttggggattgagaacggat
ggtatctttcaaaccgaagctgatgtgcaaaattatagaaatagcagtgacggactggta
caacctagcgcccaacctggcgatgttcgatatattgatttaaatggtgacgggaaaata
gatgctaacgataaaactatgattggcaaccctaacccggactacacctttggcatcagc
ttgtcagccaattataaagggtttgattttactttacaagcaaccggtgttgcgggcaat
caattagtgcaatcttatcgtaatcaccccaacccctacgcaaactacaccaccgctata
ctcgaccgctggcatggcccgggatcgtctaatacgatacctcgcgttacggaagatgca
cgtaactggacaaatttttccgacttatatatacatgatggcgattttcttcgcattagc
accattaccttgggttatgacttcggcaaaatcattaagaaaaattacctccggaaggta
cgtgtttatgcatcggtattaaacgcctttacctttacgaagtatgaaggtatggatccc
gaaataggttatacggaagggtttgcatccggtgttgacttagggtattatcctagacct
agaacctttatgattggaactaatattacattctaa
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