Sphingobacterium sp. 21: Sph21_4095
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Entry
Sph21_4095 CDS
T01450
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
shg
Sphingobacterium sp. 21
Pathway
shg02010
ABC transporters
shg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sph21_4095
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sph21_4095
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shg01002
]
Sph21_4095
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_4095
Peptidases and inhibitors [BR:
shg01002
]
Cysteine peptidases
Family C39
Sph21_4095
Transporters [BR:
shg02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Sph21_4095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
AAA_21
AAA_29
ABC_ATPase
RsgA_GTPase
nSTAND1
AAA_23
AAA_16
nSTAND3
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADZ80628
UniProt:
F4C8M0
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All DBs
Position
4953713..4955878
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AA seq
721 aa
AA seq
DB search
MTKRVKQRDITDCGAACIASVAAHYKLAISVANVRQMAGTDKKGTTVLGILEAAQLLGFE
AKGVRGPFESLFKIPKPAIAHIVVEGVLQHYVVIYKVTKRWIEVMDPLDGQFHKKSHEDF
KKIWTGALVLLIPSESFEKGRKTASASYRFWNLVKPQTGTLIQILMGALVYTILGLSTAI
FVQKIVDFVLVDRNVNLLNLMSTMMLVLLGFQLFIGATKTIFTLKMGQIIDAQLILGYYK
HLLTLPQKFFDTMRVGEVISRINDAVKIRIFLNEVSVNFLVNIFIVTFSFLMMFTYYWKL
GLLILTVIPMYLVVYFISNKLNKKAQRTLMEDSAELESQLVESLNSIRTIKQFGAESYAN
EKTETRFVKLLKTGYRSNLNGVFSTTSSELISRLITIVLLWVGATYVLSNQITPGELLSF
YALIGYFTGPVTSLITMNKTVQDAMIATDRLFEILDLEREKDSSDLELTKENIGDIQIKN
VSFRYGTRDNVFDELSLTIPKAKFTAIVGESGSGKSTLISILQNLYPVQSGTITIGKYDL
KHIKNTSLRQTISVVPQHIDLFSGNVVSNIALGDYTPDMQRIIDITTQLGIIDFIESLPQ
GFYTSIGENGLSLSGGQRQRIAIARALYRNPEILILDEATSSLDSASEKFVLNTIEHLKK
ENKTIIVIAHRLSTLYSADKIIVLDKGKVIEQGTHQELLLSTDSLYAHLWKMQSQQLILK
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagagtaaaacaacgtgatataaccgactgtggagctgcttgtattgcatct
gttgccgctcactataaattggcaatttccgtagcgaatgtaaggcagatggcagggacg
gataaaaaaggaaccacggtactcggcatcttagaagcggcccaattgttaggctttgag
gcaaaaggagttaggggaccctttgaaagcctttttaaaattccaaaaccggccattgct
catatcgtagtggagggagtgctgcagcactatgttgtcatatataaagtgacgaagcgc
tggattgaggtcatggatccactggatggccaatttcataagaaatcgcacgaagacttt
aaaaagatatggaccggtgcccttgtcttattgattccttcggaatcattcgaaaaaggc
aggaaaacagctagtgcctcttaccgtttctggaatcttgtaaagccacaaaccggcacg
ctgatccaaatattgatgggagccctcgtatatactattttggggttatctacggccata
tttgtacagaaaatcgtagattttgttttggttgacagaaatgtcaacctgctgaatctc
atgagtacaatgatgctggttttgctcggatttcaactatttattggtgccacaaaaacc
attttcacactaaaaatggggcagattattgatgcccaacttatacttggttactataag
cacctgttaacattgcctcaaaaattttttgacaccatgcgagtcggtgaggttatttca
agaatcaatgatgctgtaaaaatcaggatatttctcaatgaagtaagcgttaactttttg
gtaaacattttcattgtaactttttcttttttaatgatgtttacctactactggaaactg
ggcttacttatacttaccgtgattccaatgtatctagtagtctattttataagtaataaa
ctgaataaaaaggcccaaagaacattaatggaggattctgctgaactcgaatctcaactt
gttgagagcctaaattctattcggaccattaaacagttcggcgccgaaagctacgccaat
gaaaaaaccgaaacaagattcgtaaagttgttgaaaacaggataccgttccaatttgaat
ggggtgttttctactacctcctcggaattgatttcaagactgattacaattgttctttta
tgggtaggagccacgtatgtcttgagcaaccaaattacgccgggcgaactcctttcattt
tatgcgctcatcggttattttacggggcccgtcacgtcgctaatcaccatgaacaaaaca
gtccaggatgccatgatcgctaccgaccgtctttttgaaatactcgatttggagcgcgaa
aaagacagcagtgacctcgaattaacgaaagaaaatataggcgacatccaaattaagaac
gtatcctttaggtatggaacacgagataacgtctttgacgaattaagcttaacaattccc
aaggcgaagtttaccgccatcgttggtgaaagtggatccggcaagtcgaccctcatttct
atcttgcaaaatctttatcccgttcaaagtggaactattaccattggcaaatacgattta
aagcacataaaaaacacctctcttcgccaaacgatttctgttgtacctcaacatattgat
ttgttttcgggcaatgtagtaagtaatattgcgctgggagactatacccccgatatgcag
cggatcatcgatattaccactcagctcggaattatagattttattgaatcgttaccccaa
ggcttctacacctctataggggaaaatggtttgtcactttccggtgggcaacgccaacgg
atcgctatagcccgagccttatatcgaaatccggagattttaatccttgatgaagcaaca
tcttcactcgactccgcttcagagaaatttgtattgaacaccatcgaacatctgaaaaaa
gaaaataaaaccattattgtcatagcacatcgcctaagcacactttatagtgccgacaaa
atcatcgtcctcgataaaggtaaggtcatcgaacagggaacacatcaagaattactacta
agcacggattcgctttacgcacatttatggaaaatgcaatcccaacagctcattctgaag
aactaa
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