Sphingobacterium sp. 21: Sph21_4142
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Entry
Sph21_4142 CDS
T01450
Name
(GenBank) Protein of unknown function DUF2219
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00540
Lipopolysaccharide biosynthesis
shg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sph21_4142
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shg01005
]
Sph21_4142
Lipopolysaccharide biosynthesis proteins [BR:
shg01005
]
Lipid A
Sph21_4142
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
ADZ80674
UniProt:
F4CAA9
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Position
complement(5006196..5007164)
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AA seq
322 aa
AA seq
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MSLRSISHTQVLLMGVCIFLCLIAYKGRAQTELLHELSIHSDNDAYLFINQDQYYTNGIS
FSYRQLVDKDFSAASAKKKIWGITIGHKLYNAYNGFSELVLMDRPFTAYLYGRASKAWLY
RDESSLNLGAEVGLYGKGAFGEALQEGFHNLFGFYEISGWEYQLRDHVTLDLRAKYSRLL
LRSTSGKMDLQLQSSMSLGLNQSFIGAGPVLRLGKLNALYASAYNGSRLFQKGEVVNKER
YFYYRPMLFYRLYDASIQGGMLLDDKGPVTFGIKPWMLSQIVGFTYAHRHVTIDAHLQFN
TKEVKSNATAHQFGSISIGYAF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcttacgatcgatcagccatacgcaagtcctattgatgggcgtgtgtattttttta
tgtttaattgcgtataaaggacgtgcgcagactgaactgttacatgaattgtctattcat
agtgataacgatgcctatttgttcattaatcaggaccaatactatactaacggaatatcc
tttagctatcgtcaattagtcgacaaggattttagtgctgcgagtgctaagaagaagatc
tggggaataacgataggccataaactatataatgcatataacggtttcagcgagttggta
ttgatggacaggccttttacagcctacttatatggaagagcaagcaaggcatggctctat
cgggacgaatcgagcttaaaccttggtgcagaagtgggcttatatggtaaaggtgctttt
ggcgaggcgctacaggaaggttttcacaatctgttcggcttttatgaaatcagcggttgg
gagtatcaattgcgcgatcatgtaacactggatttgcgggcgaagtatagtcgactgcta
ctacgaagtacctccggtaaaatggatctgcagcttcaatcaagcatgtctctgggctta
aatcaaagttttatcggtgcgggcccggtattgcggcttggcaaattgaacgctttgtac
gcgtctgcttataacgggagtcggttatttcaaaaaggcgaggttgtcaataaagagcgt
tacttttactatcggccaatgctgttttaccgattatacgatgcgagcatacagggaggg
atgttactggatgacaaaggacctgttacctttggcattaagccttggatgcttagtcaa
attgttggcttcacttatgcgcatcgtcacgtaacgatcgacgcgcatctccagtttaat
accaaagaagttaaaagtaatgccactgcccatcagtttggctccatttcgattggatat
gccttttaa
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