Sphingobacterium sp. 21: Sph21_4589
Help
Entry
Sph21_4589 CDS
T01450
Name
(GenBank) glycosyl hydrolase BNR repeat-containing protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00511
Other glycan degradation
shg00600
Sphingolipid metabolism
shg01100
Metabolic pathways
shg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Sph21_4589
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Sph21_4589
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Sph21_4589
Enzymes [BR:
shg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
Sph21_4589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR
BNR_3
Sortilin-Vps10
Nup98_GLEBS
Motif
Other DBs
NCBI-ProteinID:
ADZ81104
UniProt:
F4C8R2
LinkDB
All DBs
Position
complement(5489558..5490805)
Genome browser
AA seq
415 aa
AA seq
DB search
MWITKPINLAYLGLGFVLSIALSCAKVTNADREKLPGLDQEQSLTEHAALAAPINTRIIV
FNGGSEGIYHSYRIPSIIKTKNGTLVAFAEGRRWSPSDYGDINVVFKRSMDNGTTWSALG
EVVGKGNGTWGNPTAVYDPSVGVNGRIWLFLEWNDEFKTKWSDFQAWGDRRIHTSYSDDH
GATWSDPVDRTGTLTPLSYKWDCVGPGIGIRTAYDHPGRLIVPAYGRNIYSDDHGATWSY
EPVPGGTDESTIVELMNGSLMRNDRPNTTEWNISKTRRKSVGSISGNFSSFSAVSALPDP
KCEGSILRYNVDDPNRIIFLNPNGTSQRCNMTVRISYDDGETWPISRALYDSGNCNYTTS
TVVYGGYSSMVKTSDYCIGALIEYNENVHDSANSNKSIEFNKFNLAWILNGRTEP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtggattactaaaccaattaatctggcatacctcggtttaggttttgttttgtctatc
gcattgagttgcgctaaagtaacaaatgccgatcgagaaaaactaccgggtcttgatcag
gagcaaagtcttactgagcatgcagccttagcagcaccaattaacacgcggataattgtt
tttaacgggggtagtgaagggatttaccattcgtaccgtatcccatcgattattaaaacc
aagaacggaacgctggtagcttttgcggaaggtaggcgctggagtccaagcgactatggc
gatatcaatgtggtatttaaaaggtcgatggataacggaacaacctggtcggcattagga
gaggtagtgggaaaaggaaatggtacctggggaaatcccacagctgtttatgacccttcg
gtaggcgtaaacggtagaatatggctctttttagaatggaacgacgaattcaaaaccaaa
tggtcggattttcaagcttggggtgatagaagaattcatacttcatacagtgatgatcat
ggcgctacttggtctgatcccgtagatcgcaccggtacattaactcctttgagttataaa
tgggattgtgttggtccagggatcggtatcagaactgcttacgatcatccaggtagatta
attgttccggcatacggaagaaatatttatagcgatgatcatggagcgacctggagttat
gaacctgtcccgggtggtacggatgaaagtaccatcgttgagctaatgaacggaagttta
atgcggaatgatcgtcccaatacaacggagtggaatatttcaaaaacaagaaggaagtct
gtggggtcaatttccggaaatttttcttctttttctgctgtttccgctcttcccgatccg
aagtgcgagggctctatacttcgatataatgtggatgatccgaatagaataattttttta
aatccaaacggcacaagtcaacgctgtaatatgactgttcgcatcagctatgatgatgga
gagacctggccaataagcagagctctgtacgacagcggaaactgtaattatacgacaagc
accgtggtttacggtggatactcgagcatggttaaaacctcggattattgcattggtgcg
ctgattgaatataatgaaaatgtacacgattcagccaacagtaacaaatctattgagttc
aacaaatttaacctagcctggatattgaatggtcgcacagaaccgtaa
DBGET
integrated database retrieval system
